Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1711 ATGGCAGTCTCCGCTCTACCCAACGCCAATGCCCTTCAAATCTCTAATCCCAAATTCATTTTCTCTTATTATTCTCCTTATTGTCATTCAAAACCAAATAGTTGGAAGCCTAAGCTTTCTTCGACCTCCACGTCTGCAACTAGGAAGCCATCATTTCTTGACATTAGTCTTGGAGTTGTAGCTGCTTCAGTGCTAGCGTTGACACCCTTGGAAGCTGATGCGACTAGAATCGAATACTACGCTACTGTGGGAGAGCCTTTATGTGAACTTAACTACGCAAAATCCGGTCTTGGCTACTGCGATATTTTGGAGGGCCCTGGGGACGAAGCCCCTCTCGGCGAGCTTATCAATGTTCACTACACTGCAAGATTCGCTGATGGGACAGTCTTTGATAGCAGCTACAAACGTGCAAGACCTCTCACCATGCGCATTGGTGTTGGAAAGGTCATCAAGGGATTGGATCAGGGAATTTTAGGGGGTGAAGGAGTACCTCCAATGCGGATAGGTGGGAAACGTAAACTAAGGATTCCTCCACATTTAGCATACGGCCCAGAACCTGCGGGATGCTTTTCAGGTGACTGCAACATACCAGGCAATGCCACTCTTCTATATGATATTAAGATTGTTGGTATTTACTCCGGTAATGCAAAGTAA 654 0.4602 MAVSALPNANALQISNPKFIFSYYSPYCHSKPNSWKPKLSSTSTSATRKPSFLDISLGVVAASVLALTPLEADATRIEYYATVGEPLCELNYAKSGLGYCDILEGPGDEAPLGELINVHYTARFADGTVFDSSYKRARPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLRIPPHLAYGPEPAGCFSGDCNIPGNATLLYDIKIVGIYSGNAK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1711 217 SUPERFAMILY FKBP-like 92 211 - -
Glsi13g1711 217 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 113 212 IPR001179 GO:0003755
Glsi13g1711 217 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 30 217 IPR044183 GO:0009507
Glsi13g1711 217 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 110 208 IPR001179 GO:0003755
Glsi13g1711 217 Gene3D - 86 211 IPR046357 GO:0003755
Glsi13g1711 217 FunFam Peptidylprolyl isomerase 85 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1711 Glsi-ChrGlsi13 33401191 33402850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1711 94 209 Calmodulin-binding Proteins AT3G25230 40.678 2.68e-15 72.4