Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1692 ATGGTTTGGGTTGCAATTTTACTAGTTTCCCTTGCTTATCTGCTTGGATCATGTCTGTGGATAAACGGGAGGAAGAAGGCGAAGAGATTACCACCTGGTCCAAGAGGGTTGCCAATTTTGGGAAACCTTCATATGCTAGGGGCTAATCCTCATCGTGATCTGCACCAACTAGCCCAAAAATATGGACCCATCATGTACTTGCGGTTAGGCTTTGTGCCAACCGTCGTTGTTTCTTCGCCCCAAGCTGCAGAACTGTTCCTCAAGACCCACGACCTCGTCTTTGCTAGCAGACCAACCAATGAGGCTGCAAAGTACATCTCTTGGGAGCAGAGGAACTTGAGCTTCGGTGAATATGGTTCTTACTGGCGCAACATGCGTAAGATGTGCACCTTGGAATTACTGAGCAGTTCCAAAATCAATTCCTTCAGATCTATGAGAAAAGAGGAGCTGGACATTTTGATAGAGCTTCTAAAAGAGGCGACCCGTGATCGAGCTGCCGTTGATCTCAGTGCCAAGGTGGCTACACTCAGTGCAGACATGAGTTGTAGAATGGTTTTAGGGAAGAAGTACATGGACCAAGAGTTTGATGAGAAGGGGTTCAAGGCTGTAATGCAAGAGGGAATGCAGTTAGCTGCAACTCCTAACATGGGGGATTACATTCCTTACGTTGGTGCCCTTGATCTTCAGGGTCTCACCCGTCGCATGAAAGCAGTCGGCAAAATCTTCGACGACTTCTTTGAGAAAATCATTGACGAGCATATACAATCTGAGAACAAGGACGACAAGACCAAGGATTTCGTGGATGTCATGTTGAGCTTTGTAGGGACTGAAGAATCAGAATACCGTATTGAGCGGCCCAATATCAAAGCTATAATCTTGGATATGCTGGCGGGGTCAATGGACACTTCTGCTACAGCTATTGAATGGACACTTTCGGAGCTCATAAAGAATCCAAATGTGATGAAGAAAGTGCAGAAAGAGTTGGAAAGTGTGGTGGGTATGGAGAGGAAGGTGGAGGAATCAGACTTGGACAAGTTGGAGTACTTGGACATGGTTATAAAGGAAAGCATGAGGATGCATCCAGTGGCACCCTTACTGATCCCACATGAATCCATGGAAGACTGCGTGGTTGGAGATTATTTCATACCCCGAAAATCCAGAGTGATAATAAACGCCTGGGCCATTATGCGAGACCCGAGCGCTTGGAGTGAGGCAGACAAGTTCTGGCCAGAGAGGTTCGAGGGAAGTAGCATAGATGTACGAGGACGTGATTTCCAGCTGATACCATTTGGGTCAGGGAGAAGGGGATGCCCTGGAATGCAATTGGGTCTAACTGTAATTCGCTTAGTGGTGGCACAGCTGGTGCATTGCTTTGACTGGGATCTTCCGCATGGTATGTTGCCAACTGATTTGGACATGAAAGAGGAGTTTGGGCTCACAACTCCTAGGGCCAACCATCTAGTTGCCATTCCTACAAGTTATCGCCTGCACAAGTGA 1497 0.4723 MVWVAILLVSLAYLLGSCLWINGRKKAKRLPPGPRGLPILGNLHMLGANPHRDLHQLAQKYGPIMYLRLGFVPTVVVSSPQAAELFLKTHDLVFASRPTNEAAKYISWEQRNLSFGEYGSYWRNMRKMCTLELLSSSKINSFRSMRKEELDILIELLKEATRDRAAVDLSAKVATLSADMSCRMVLGKKYMDQEFDEKGFKAVMQEGMQLAATPNMGDYIPYVGALDLQGLTRRMKAVGKIFDDFFEKIIDEHIQSENKDDKTKDFVDVMLSFVGTEESEYRIERPNIKAIILDMLAGSMDTSATAIEWTLSELIKNPNVMKKVQKELESVVGMERKVEESDLDKLEYLDMVIKESMRMHPVAPLLIPHESMEDCVVGDYFIPRKSRVIINAWAIMRDPSAWSEADKFWPERFEGSSIDVRGRDFQLIPFGSGRRGCPGMQLGLTVIRLVVAQLVHCFDWDLPHGMLPTDLDMKEEFGLTTPRANHLVAIPTSYRLHK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1692 498 PANTHER CYTOCHROME P450 93A3-LIKE 4 497 - -
Glsi13g1692 498 SUPERFAMILY Cytochrome P450 31 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Glsi13g1692 498 CDD CYP71-like 60 487 - -
Glsi13g1692 498 Gene3D Cytochrome P450 20 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1692 498 FunFam Cytochrome P450 83B1 18 490 - -
Glsi13g1692 498 Pfam Cytochrome P450 31 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1692 Glsi-ChrGlsi13 33289096 33290664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1692 6 494 Cytochrome P450 AT3G26300 39.157 6.33e-134 395