Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1691 ATGAATTCCGTACCCAACTTCTCTGTTACGGTTTTTTCTCTTTTTTTCCTTTATTTTATCTTCTCAGGTTCCGCCTCAGAAGCTGAACTCCGATCTTTGCTTGAATTCAAGAAAGGGATTCAAACAGATCCGCTTGGCAGAGTTTTCGAATCATGGAAACTGTCTTCACTCAGAGACCTCAACGACTGTCCTCGCTCTTGGACTGGTGTTATCTGCGACGAGGGAGCCGGCAACGTCACCGCCATAGTTCTCGATAGGCTCCGCTTGGGAGGGGAGCTGAAATTTCACACTCTGCTTGAACTCAAGATGTTAAGGAATCTCACCCTTTCAGGAAATGACTTCACTGGGCGGCTGCCGCCGGCATTGGGGACATTGACCACCTTGCAGCATTTGGATCTTTCTGACAACAAGTTCTACGGGCCGATCCCAGCTCGAATTAATGAGCTTTGGGGATTGAATTACCTCAATTTGTCCATGAATGCCTTCAAGGGTGGGTTTCCGGGTGGGATAAGTAATCTTCAGCAGCTGAGACAGCTGGATTTGCATTCGAATGAACTTTGGGGTGATATTGGTGATGTGTTGTCCGCATTGCGGAATGTGGAGCATCTTGATTTGAGCTCTAATAAGTTCGTCGGGGCGCTCTCGCTTGGCGTGGAGAATATTTCGGGCTTGGCGAATACGGTGCATTTTATAAATTTGAGTCATAACAGTTTAAATGGCCGTTTCTTTGAAGGTGATTCAATTGCGTTGTTTCGTAATTTGGAAGTTTTGGATTTGGGTGACAATCAGATCAGGGGGGAGCTTCCTTCTTTTGGGTCATTGCCGAGTCTTAGAATTTTGCGTCTTGGGAGTAATCTATTATATGGGTCGATACCGGAGGAGTTGTTAGAAAGTTCCATGTCATTAGAAGAATTGGATCTTAGCGGCAACGGGTTTACGGGCTCAATTCTTTCAATCAACTCTACAACTTTGAATATTTTGAATCTTTCATCGAATGGTTTATCAGACTCTTTGCCTACATCTTTGAGAAGATGTACTGTCATGGACTTGAGCAGGAATATGTTCTCTGGTGACATATCTGTTATTCAGAACTGGGAGGCCACATTGGAAATTCTTGATCTGAGTTTGAACAGGCTGTCAGGAAGCTTTCCAAATTTGACAAGTCAGTTTGAGGGATTAACCACACTTGCTCTCAGGAATAATTCTTTAGTTGGACCCTTGCCTCCTCTTTTGGGGACCTATTCTAAATTGTTTATGGTTGACTTCAGTTTAAATGAACTTAGTGGACCTATTCCTGGTAGTTTATTTGCTTCAACAACATTGACAACCCTGAATCTTTCTGGAAACCATTTTACTGGGTCAATTCCTCTTGAAGGTTCAGGAGCAAGTGAATTAATACTTATGCCTCCATATCGGCCAATGGAATATCTTGATGTATCCAACAACTACTTAAAAGGCATCTTACCTTCTGATATAAGTAGGATGGGCAGGCTCAAACTGCTGAATCTTGCCAGGAATGACTTTTCAGGACAGCTGCCAAATGAATTGAGCAAACTTGTTAATTTGGAGTACCTCGATTTGTCTAACAACAAATTTATGGGACAAATTCCTGATAAGCTTTCATCCAGCTTGAATGTATTTAATGTGTCCAATAATGATTTATCTGGGCAGGTTCCGGATAATTTGAGGAGGTTCCCTCCTTCATCCTTTCACCCTGGAAATGAAAAGCTGAACTTACCAAATAATTTACCTGGAACTAGTTCAGTGCCTGATAATATCTCTGATCAAGGGAAACATCATAGTTCAAAAGGCAATATTAAGATAGCCATTATTCTTGCCTCAGTGGGTGCTGCTGTGATGATTGTTTTTGTTCTATTGGCTTATCATCGAACAAAACTTCAAGAATTTCATGGAAGAAGTGAGTTTAGTGTTCAAAATACTGGACCAGATATCAAGTCAGAAAGACTTGCACAGCCTTCCCTCTTCAAGTTCCATACAAATGTTCAGCCCCCACCAACTTCACTGAGTTTTTCAAATGATCACTTGCTGACATCCAATTCAAGGTCACTCTCTGAACAGTCAGAGTTTATAACTGAAATTACTGAGCATGCCTTACCTAAGGGAATTGTAGCAGCTAGTTCAGCTTCTGTAAATCCCGATTTGATGGATAACCCTCCCACATCGTCTGGAAGAAAGTCATCTCCTGGTTCCCCATTATCTTCCTCTCCCCGTTTTATAGAAGCATGTGAAAAACCAGTGATGCTGGATGTGTACTCACCAGATCGTCTAGCTGGAGAATTGTACTTCCTTGATTCTTCCCTGGCATTCACTGCAGAGGAATTATCTCGAGCTCCTGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATACAAAGCTACTCTAGACAGTGGTCATATGTTGACTGTGAAGTGGTTACGGGTGGGACTGGTCAAACATAAGAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTACGGGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTACTTTTAGCTGACTATATACATGGCGACAGCTTGGCCCTACATCTTTATGAGACAACACCCCGGAGGTACTCACCATTATCATTCAGCCAGAGATTAAGAGTTGCTGTTGAAGTTGCTCAATGTCTTTTATACCTTCATGATCGAGGGCTTCCCCACGGAAATCTAAAACCAACAAATATATTATTAGCAGGCCCTGATTACAATACACGTCTAACTGACTATGGTCTGCACCGCCTCATGACGTCAGCCGGAATTGCGGAGCAGATACTAAATCTTGGAGCACTTGGATACCGTGCTCCAGAACTTGCTTCTGCAACCAAACCAGTTCCATCTTTTAAGGCAGATGTCTATGCACTTGGTGTGATCCTAATGGAATTATTAACCAGAAAAAGTGCAGGTGACATAATATCAGGGCAGTCCGGGGCAGTTGATCTAACAGATTGGGTTAGGCTATGTGAGCAAGAAGGACGGGTAATGGATTGTATTGACAGAGACATTGCAGGGGGGGAAGAATCCTCCAAGGAGATGGACGCATTGCTTGCAATATCTATCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTCTTGACGATCTCTGTTCTATATCGCTTTGA 3192 0.4292 MNSVPNFSVTVFSLFFLYFIFSGSASEAELRSLLEFKKGIQTDPLGRVFESWKLSSLRDLNDCPRSWTGVICDEGAGNVTAIVLDRLRLGGELKFHTLLELKMLRNLTLSGNDFTGRLPPALGTLTTLQHLDLSDNKFYGPIPARINELWGLNYLNLSMNAFKGGFPGGISNLQQLRQLDLHSNELWGDIGDVLSALRNVEHLDLSSNKFVGALSLGVENISGLANTVHFINLSHNSLNGRFFEGDSIALFRNLEVLDLGDNQIRGELPSFGSLPSLRILRLGSNLLYGSIPEELLESSMSLEELDLSGNGFTGSILSINSTTLNILNLSSNGLSDSLPTSLRRCTVMDLSRNMFSGDISVIQNWEATLEILDLSLNRLSGSFPNLTSQFEGLTTLALRNNSLVGPLPPLLGTYSKLFMVDFSLNELSGPIPGSLFASTTLTTLNLSGNHFTGSIPLEGSGASELILMPPYRPMEYLDVSNNYLKGILPSDISRMGRLKLLNLARNDFSGQLPNELSKLVNLEYLDLSNNKFMGQIPDKLSSSLNVFNVSNNDLSGQVPDNLRRFPPSSFHPGNEKLNLPNNLPGTSSVPDNISDQGKHHSSKGNIKIAIILASVGAAVMIVFVLLAYHRTKLQEFHGRSEFSVQNTGPDIKSERLAQPSLFKFHTNVQPPPTSLSFSNDHLLTSNSRSLSEQSEFITEITEHALPKGIVAASSASVNPDLMDNPPTSSGRKSSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELYFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLRAYYWGPREQERLLLADYIHGDSLALHLYETTPRRYSPLSFSQRLRVAVEVAQCLLYLHDRGLPHGNLKPTNILLAGPDYNTRLTDYGLHRLMTSAGIAEQILNLGALGYRAPELASATKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEQEGRVMDCIDRDIAGGEESSKEMDALLAISIRCILPVNERPNIRQVLDDLCSISL 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1691 1063 Gene3D Ribonuclease Inhibitor 25 215 IPR032675 -
Glsi13g1691 1063 SUPERFAMILY L domain-like 52 358 - -
Glsi13g1691 1063 Gene3D Ribonuclease Inhibitor 219 585 IPR032675 -
Glsi13g1691 1063 SUPERFAMILY Protein kinase-like (PK-like) 786 1058 IPR011009 -
Glsi13g1691 1063 FunFam Pollen receptor-like kinase 1 861 1063 - -
Glsi13g1691 1063 Pfam Leucine Rich repeats (2 copies) 253 291 IPR025875 -
Glsi13g1691 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 244 465 - -
Glsi13g1691 1063 Pfam Protein kinase domain 787 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1691 1063 Pfam Leucine rich repeat N-terminal domain 27 73 IPR013210 -
Glsi13g1691 1063 FunFam Leucine-rich repeat receptor protein kinase EMS1 468 561 - -
Glsi13g1691 1063 Gene3D Transferase(Phosphotransferase) domain 1 862 1063 - -
Glsi13g1691 1063 SMART LRR_typ_2 173 197 IPR003591 -
Glsi13g1691 1063 SMART LRR_typ_2 274 298 IPR003591 -
Glsi13g1691 1063 SMART LRR_typ_2 519 543 IPR003591 -
Glsi13g1691 1063 SMART LRR_typ_2 101 125 IPR003591 -
Glsi13g1691 1063 SMART LRR_typ_2 251 273 IPR003591 -
Glsi13g1691 1063 FunFam Nuclear pore complex protein NUP107 26 192 - -
Glsi13g1691 1063 ProSiteProfiles Protein kinase domain profile. 783 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1691 1063 Pfam Leucine Rich repeat 299 317 IPR001611 GO:0005515
Glsi13g1691 1063 Pfam Leucine Rich repeat 438 453 IPR001611 GO:0005515
Glsi13g1691 1063 FunFam Leucine-rich repeat receptor-like protein kinase 768 860 - -
Glsi13g1691 1063 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Glsi13g1691 1063 Pfam Leucine rich repeat 475 532 IPR001611 GO:0005515
Glsi13g1691 1063 MobiDBLite consensus disorder prediction 716 743 - -
Glsi13g1691 1063 MobiDBLite consensus disorder prediction 574 595 - -
Glsi13g1691 1063 Gene3D Phosphorylase Kinase; domain 1 765 860 - -
Glsi13g1691 1063 SUPERFAMILY RNI-like 342 582 - -
Glsi13g1691 1063 PANTHER OS07G0626500 PROTEIN 9 104 - -
Glsi13g1691 1063 SMART LRR_sd22_2 125 151 - -
Glsi13g1691 1063 SMART LRR_sd22_2 366 395 - -
Glsi13g1691 1063 SMART LRR_sd22_2 197 226 - -
Glsi13g1691 1063 SMART LRR_sd22_2 251 276 - -
Glsi13g1691 1063 SMART LRR_sd22_2 519 546 - -
Glsi13g1691 1063 MobiDBLite consensus disorder prediction 717 741 - -
Glsi13g1691 1063 MobiDBLite consensus disorder prediction 562 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1691 Glsi-ChrGlsi13 33281814 33288114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1691 101 593 Receptor kinase-like Gene Family AT5G46330 35.341 3.57e-53 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi13g1691 Pkinase 3e-29 CL0016