Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1675 ATGGACTACTATTTTCAAAACCCTAACCATCCTCGATACTACTCTGCCGTAAATATGGGCCCATCCTCATCTGAGTTCCTGTTCTCAGATTATCTCGCGCTCGATGATGGTGTCGGTCACCAAGATTCATGGTCACAAAGCACAGAATCATCGGAGAAGGTAACCAGCGATGCCAGTGGATTTAGTAGTACTGGTGCAACGTCGTCAAACAACAACAACATAAAATGCAAAAATGGAATTAAACGAAACAAGGAAGAGATGAACCGAAGGATCGCGTTTAGAACCAGATCTGAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAGTACGGAAAGAAGTCGGTGAAGAACAGTCCGAATCCAAGGAACTACTACAAGTGTTCAAGTGGAGGATGTAATGTGAAGAAAAGGGTGGAAAGGGAGAAGGATGACCCAAGCTATGTGATAACAACTTATGAAGGAGTACACAATCACGAGGGCCCATGTGCCGCCTACCACCACCAAATCTCCTTCCTCCATTCTGCAAATTCATCGTCTACCTAG 546 0.4451 MDYYFQNPNHPRYYSAVNMGPSSSEFLFSDYLALDDGVGHQDSWSQSTESSEKVTSDASGFSSTGATSSNNNNIKCKNGIKRNKEEMNRRIAFRTRSELEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSGGCNVKKRVEREKDDPSYVITTYEGVHNHEGPCAAYHHQISFLHSANSSST 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1675 181 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 167 IPR044810 GO:0003700
Glsi13g1675 181 SUPERFAMILY WRKY DNA-binding domain 94 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi13g1675 181 Gene3D WRKY domain 89 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi13g1675 181 MobiDBLite consensus disorder prediction 42 73 - -
Glsi13g1675 181 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi13g1675 181 FunFam WRKY transcription factor 57 88 162 - -
Glsi13g1675 181 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi13g1675 181 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1675 Glsi-ChrGlsi13 33164861 33166265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1675 31 170 WRKY Transcription Factor Family AT5G64810 48.276 5.55e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi13g1675 WRKY 2.9e-24 CL0274