Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1671 ATGGGTCCCTTTACACTGCCCGTTATTGCGAAAGGCTCTTCCATATCATCACCAGATGCTAGTACCAAGAGAACGCAGAACTCATTGCTGAGAAAATCTTTTGCATCAGTTAGCATGGGAGAGGAAAAGCCCTTTGATTTTTTACGCACTTTATTTGAGGGGGCTGTTGCAGGAGGTACTGCTGGAGTAGTTGTTGAAACAGCGTTATACCCAATTGACACTATAAAGACACGCTTGCAGGCAGCTCGTGGAGGAGAAAAATTAATATTGAAAGGCCTTTATTCAGGATTGGCAGGGAATCTTGCTGGTGTCTTACCGGCATCTGCTCTATTTGTTGGAGTCTATGAACCTATAAAGCAGAAATTGTTGAGGATATTTCCTGAAAATCTTAGTGCTTTTGCTCACTTCACTGCAGGTGCCATAGGGGGCATTGCTGCTTCACTGATTCGTGTTCCCACAGAGGTTGTTAAGCAACGAATGCAAACTGGTCAGTTCACTTCAGCTTCACGTGCTGTCAGCTTTATTGCTTCTAAGGAGGGATTTAAAGGACTTTATGCAGGGTATGGATCTTTTTTACTGAGGGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGCTTCGAATAGGTTATATGCTAGCGGCTCGAAGAAATCTGAATGATCCGGAAAATGCCATTATTGGTGCTTTTGCTGGTGCACTAACTGGAGCTATAACTACTCCCCTTGATGTAATCAAGACAAGGTTAATGGTTCAGGGATCCGCAAATCAATACAAGGGAATCGTGGATTGTGTTCAAACTGTCATTAAGGAAGAGGGACCTGGAGCCTTTCTGAAGGGTGTTGGGCCAAGGGTACTATGGATAGGGATAGGGGGTTCAATCTTCTTTGGCATCCTGGAGAGCACAAAGCGTTTTCTTGCGGAGAGGCGTCCTACACATGCTCACGGCTCGGACTCAAAGCAGCAGTAA 975 0.4482 MGPFTLPVIAKGSSISSPDASTKRTQNSLLRKSFASVSMGEEKPFDFLRTLFEGAVAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSAFAHFTAGAIGGIAASLIRVPTEVVKQRMQTGQFTSASRAVSFIASKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTVIKEEGPGAFLKGVGPRVLWIGIGGSIFFGILESTKRFLAERRPTHAHGSDSKQQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1671 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 212 IPR018108 -
Glsi13g1671 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 307 IPR018108 -
Glsi13g1671 324 Gene3D Mitochondrial carrier domain 52 321 IPR023395 -
Glsi13g1671 324 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 31 317 - -
Glsi13g1671 324 Pfam Mitochondrial carrier protein 130 211 IPR018108 -
Glsi13g1671 324 Pfam Mitochondrial carrier protein 225 310 IPR018108 -
Glsi13g1671 324 Pfam Mitochondrial carrier protein 51 85 IPR018108 -
Glsi13g1671 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 121 IPR018108 -
Glsi13g1671 324 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Glsi13g1671 324 PRINTS Mitochondrial carrier protein signature 54 67 IPR002067 GO:0055085
Glsi13g1671 324 PRINTS Mitochondrial carrier protein signature 67 81 IPR002067 GO:0055085
Glsi13g1671 324 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Glsi13g1671 324 SUPERFAMILY Mitochondrial carrier 52 302 IPR023395 -
Glsi13g1671 324 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 53 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1671 Glsi-ChrGlsi13 33145705 33152198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1671 128 313 Chloroplast and Mitochondria Gene Families AT1G07030 31.414 7.59e-17 78.2