Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1669 ATGTCTACGACCTCCCAACACAGTTTGTTTGAGGATCAAGATCAGATGCCTGCACAGCTGGGCTTCCTTCCTTTCCCAGTAAATCTGACCTTTCCTCCTTTGAAAGCCTTCAATAACGTCATAGCTCCTAATTCACTTGCATCGGAAACAGCCTCTGCTACAAATCTAACGGAAACCCTACTCGCAGCCGCTGCTCAAAAGCCAAGACAAGACCTCACTTGTAGTTTTGGAGGAACCCAACTCCTTTCCCTGCATAGATCCAGCGTAAATCCATGGGCATGGGGAGAAGTAAGCGATTGCCTGAGCCATAAAAGAAGTGGAGGAGATGATAATCATCTGGGGATTTCAGCTGGGATGAAGATGAAGAAAATCAAGGGAAGGAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTGTTGGACGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACGCAGCACCCAAGAAGCTACTACCGTTGCACACAAGACAATTGTCGCGTTAAGAAACGCGTGGAACGCTTGCCCGAAGATCCAAGGATGGTGATAACCACATATGAAGGGAGACACGTACACTCCCCGTCTAATGATCTCGAAGACTCACAATCTCCTTCTCAACTTACCAATTTCTTGTGGTAG 672 0.4762 MSTTSQHSLFEDQDQMPAQLGFLPFPVNLTFPPLKAFNNVIAPNSLASETASATNLTETLLAAAAQKPRQDLTCSFGGTQLLSLHRSSVNPWAWGEVSDCLSHKRSGGDDNHLGISAGMKMKKIKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLPEDPRMVITTYEGRHVHSPSNDLEDSQSPSQLTNFLW 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1669 223 Pfam WRKY DNA -binding domain 147 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi13g1669 223 MobiDBLite consensus disorder prediction 200 219 - -
Glsi13g1669 223 SMART WRKY_cls 146 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi13g1669 223 FunFam WRKY transcription factor 57 132 206 - -
Glsi13g1669 223 ProSiteProfiles WRKY domain profile. 141 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi13g1669 223 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 107 207 IPR044810 GO:0003700
Glsi13g1669 223 Gene3D WRKY domain 133 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi13g1669 223 SUPERFAMILY WRKY DNA-binding domain 138 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1669 Glsi-ChrGlsi13 33138998 33140854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1669 54 223 WRKY Transcription Factor Family AT4G39410 50.909 6.21e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi13g1669 WRKY 8.4e-25 CL0274