Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1667 ATGGGTGTCACTCTCAGAAGGTGTTCCTTAGCTCTCGTGTGGCATTCATTTTCATTTTCATTCTCATTTCTCTCTCTATCTGGTCATCGATCTCATCCTTTTCAACTTTCGTATGGCTCTGGTCGAGTTGGACTTTTGACTCCCTTCCTAATCTTCGTCACTCCAATCACTTTCTCTCTCTTCGCTCTCAAACCGCACCTTCTCAGGCTCAGCTCTCCCTCTAATGGCAGACCTCATGCCCTAGGATCAGTTATACACCCCACTCTCTCTTCCCCAACACCTCCGAAAATGAAGTCCCTCTGCCTCCCCAACTACCACTGCTCTTTCCTCCTTTTATTTTCCCTCACTTTTCTTTCTCTCCAGCCTGCCCCCTCCTCCTCTGCTTCTTCAGCTTTCAGAGACGCCGCCACCCAGCAGCTCATCAGCTTCAAAAATACTCTCCCAAACCCATCTTTACTTCCCAACTGGCTCCCAAATCAAAACCCATGTTCCTTCACTGGGATTTCCTGTCACGAATCCCTGGTTTCTTCCATAGACCTCAGCTCCATCCCCCTGAGAACTAATTTCAGCGTTGTCTCTGCCTATCTTCTCACACTCGACCACTTGCAAGTTCTTACCCTCAAATCCACCAATCTTTCCGGTACCATTTCTTTCTCGCCTGGTTTCAGCTGTAGCACCTCATTGAGCGGCATAGATCTATCTCAGAACGCTTTGTCTGGCTCGGTTTCCTACTTATCCTATCTGGCCTCCTGTTCGGGTTTGATATCTCTCAACCTCTCCAGCAATCACCTCGATTTTTCAGGGAGAGATTCAACTGGGTTGAGGCTCAATCTTCAGGTCCTCGATCTCTCTTTCAATAATAAGATTTCGGGTCCAAATGTTCTCCCTTGGATCTTATCACCAGGCTGCGAAGACATGAAACACTTGGCTCTCAGAGGAAACAAAATCACCGGAGAAATCAACTTGTCGAACTGCAAGAATTTGCAGCATTTAGACCTTTCCTCTAACAATTTCTCCGTGGTTATTCCATCATTTGGCGAGTGTTTGGCTTTAGAGTACCTCGACATCTCTGCCAATAAGTATTACGGCGACATTGGTCGCGCCCTCTCAGACTGCGAGCAGCTCAGCTACTTGAACATTTCAAGCAACCAGTTCGCCGGTCCGATTCCCTTACTTCCGGCTGGTACTCTGCAGTTCCTTTATCTCGCCGGCAACCATTTTCAAGGACAGATTCCTGCTGGCCTAGCCGACTTGTGCTCTACCCTCGTCGAACTCGATCTTTCCTCAAACAACCTTTCCGGTATGGTTCCGAGCTATTTCAGGGCCTGTTCTTCATTGGAATCTTTTGATATATCCAACAACAAGTTCTCTGGTGAGCTACCGATTGAAATTTTCTTGGAAATCAGTAGCTTGAAAAAGCTTGTTCTTTCCTTCAATGGTTTTATCGGTCCTTTGCCTGAGACTCTGTCGCAGCTCCTGAATTTGGAATTGTTGGATCTAAGTTCCAATAACCTCACTGGGTCAATACCTAAAGGGCTTTGTCAAGATCCTAGGAATAATTTGAAAGAGCTATACCTACAGAATAATCTGTTCACGGGTTCTATTCCACCCACACTCAGCAACTGTTCTCAGCTTGTTGCCTTGGATTTAAGTTTCAACTACTTGACGGGGACTATCCCTTCCAGCTTGGGGAGTCTTTCGAAGCTCCGAGATTTGATTATTTGGCTGAACCAGCTCCATGGGGAGATACCCGAAGAGCTCAAGTACATCAAGGACCTTAAGAATTTGATTTTGGACTTCAATGAGTTGACTGGGACCATTCCTTCTGGCCTAAGCAACTGCACCAACATGAATTGGATCTCCTTGTCAAATAACAGGTTGAGCGGGGAGATTCCGGGGTGGATTGGTCAGCTTTCAAATCTTGCAATCCTGAAACTGAGTAACAACTCCTTCTCTGGGAGGATTCCACCGGAGCTTGGTGATTGTCGTAGCTTGATATGGTTAGATTTAAATACTAATTCCCTGAACGGATCAATTCCTCCTGAATTGTTTAAGCAGTCAGGCAAAATCACAGTCAATTTTATTAATCCTAAAACATATGTTTACATCAAGAATGACGGTAGTAAGGAGTGCCATGGGGCAGGAAATTTGCTAGAGTTTGCGGGTATCAGTCAGAAGCAGTTAAACAGAATTTCCACCAGGAACCCCTGCAATTTCACCAGAGTTTATAATGGTAAGATCCAGCCCATATTTAACTATAACGGTTCTATGATTTTCTTGGATATTTCACACAATCTGTTGTCGGGCAGTATTCCAAGGGAGATAGGGAGCATGTATTATTTGTACATTTTGAATTTGGCGTACAACAATATATCTGGGAACATCCCACAAGAACTTGGAAGCATGAAAAATCTCAACATTCTTGATCTCTCCAGAAATAGGCTTGAAGGGCAGATTCCACAATCCTTGACAGGCCTTTCTATGCTCAATGACATTGATTTTTCAAACAACAATCTCTCAGGATTGATTCCTGAATCTGGTCAGTTTGATACCTTTCCAGCTCCCAGATTCATGAATAATTCTGATCTCTGTGGAGTCCCTCTTCCTCTGTGTCGGGCACGCTCAGGATCAAGTGCAAATGCTCGGCATCAGTCTCACTGGAGACAGGCATCTCTGGCAAGGAATGTGTCCATGGGATTGCTGTTTTCCCTCTTCTGCATCCTAGGTTTAATTATAATTGCCTGCGAGGCAAGAAAGCGGAGGAAGAAAAAGGAAGCTACTCTTGATGTCTACATTGACAGCCGTTCTCATTCAGGTACAGCCAATGTCGGCTGGAAGCTGATAAGTGCCCCTGAAGCAAATAGCATAAATCTTGAAACATTCGAGATCGAGAAGCCCCTCCGAAAGCTTACTTTTGCAGATCTTCTTGAAGCTACTAACGGCTTCCACAATGACAGCCTTGTTGGTTCTGGTGGTTTCGGCGATGTATACAAGGCTCAATTGAAGGATGGAAGTGTCGTGGCGATTAAGAAGCTGATACATATTAGTGGACAAGGGGACAGGGAATTCACTGCCGAAATGGAAACCATAGGAAAAATTAAGCATCGGAACCTCGTTCCCCTTCTGGGCTATTGCAAAGTTGGAGAAGAAAGACTCTTGGTTTATGAATACATGAAATATGGAAGCCTAGAAGATGTTTTGCATGGTCAGAAGAAGGCCGGCATCAAGCTGAACTGGGCAGCCAGGAGGAAAATTGCGATTGGCGCTGCTAAGGGATTGGCTTTTCTTCACCACAATTGCATCCCACACATCATTCACCGAGACATGAAATCAAGCAATGTATTGCTTGATGGAAACTTGGAAGCCAGAGTGTCTGATTTTGGAATGGCCAGGCTTATGAGTGCTATGGATACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCTGGTTATGTTCCTCCCGAATACTATCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGTTACGGTGTAGTTTTATTGGAGCTACTAACAGGGAAGCGTCCAACGGATTCAGCTGATTTTGGCGACAACAATCTTGTGGGATGGGTTAAACAACATGCCAAAGTGAAAATAAGTGATGTTTTTGACCCATTACTTATGAAAGAGGACCCGAGTCTTGAGATTGAGCTTTTACAGCACTTAAAGGTCGCATCTGCTTGTCTGGATGATCGACCTTTGCGGCGTCCCACAATGATTCAAGTCATGGCAATGTTTAAGGAAATCCAAGCAGCGTCTGGGATGGATTCCCAGTCTAGCATCGCCACTGACGGTGGAGGTTTCGATGCTGTTGAAATGGTAGAGATGAGCATAAAAGAAGTCCCTGAATTAAGCAAGCAGTAA 3888 0.4504 MGVTLRRCSLALVWHSFSFSFSFLSLSGHRSHPFQLSYGSGRVGLLTPFLIFVTPITFSLFALKPHLLRLSSPSNGRPHALGSVIHPTLSSPTPPKMKSLCLPNYHCSFLLLFSLTFLSLQPAPSSSASSAFRDAATQQLISFKNTLPNPSLLPNWLPNQNPCSFTGISCHESLVSSIDLSSIPLRTNFSVVSAYLLTLDHLQVLTLKSTNLSGTISFSPGFSCSTSLSGIDLSQNALSGSVSYLSYLASCSGLISLNLSSNHLDFSGRDSTGLRLNLQVLDLSFNNKISGPNVLPWILSPGCEDMKHLALRGNKITGEINLSNCKNLQHLDLSSNNFSVVIPSFGECLALEYLDISANKYYGDIGRALSDCEQLSYLNISSNQFAGPIPLLPAGTLQFLYLAGNHFQGQIPAGLADLCSTLVELDLSSNNLSGMVPSYFRACSSLESFDISNNKFSGELPIEIFLEISSLKKLVLSFNGFIGPLPETLSQLLNLELLDLSSNNLTGSIPKGLCQDPRNNLKELYLQNNLFTGSIPPTLSNCSQLVALDLSFNYLTGTIPSSLGSLSKLRDLIIWLNQLHGEIPEELKYIKDLKNLILDFNELTGTIPSGLSNCTNMNWISLSNNRLSGEIPGWIGQLSNLAILKLSNNSFSGRIPPELGDCRSLIWLDLNTNSLNGSIPPELFKQSGKITVNFINPKTYVYIKNDGSKECHGAGNLLEFAGISQKQLNRISTRNPCNFTRVYNGKIQPIFNYNGSMIFLDISHNLLSGSIPREIGSMYYLYILNLAYNNISGNIPQELGSMKNLNILDLSRNRLEGQIPQSLTGLSMLNDIDFSNNNLSGLIPESGQFDTFPAPRFMNNSDLCGVPLPLCRARSGSSANARHQSHWRQASLARNVSMGLLFSLFCILGLIIIACEARKRRKKKEATLDVYIDSRSHSGTANVGWKLISAPEANSINLETFEIEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHGQKKAGIKLNWAARRKIAIGAAKGLAFLHHNCIPHIIHRDMKSSNVLLDGNLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKVKISDVFDPLLMKEDPSLEIELLQHLKVASACLDDRPLRRPTMIQVMAMFKEIQAASGMDSQSSIATDGGGFDAVEMVEMSIKEVPELSKQ 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1667 1295 ProSitePatterns Protein kinases ATP-binding region signature. 988 1011 IPR017441 GO:0005524
Glsi13g1667 1295 Pfam Leucine rich repeat N-terminal domain 135 170 IPR013210 -
Glsi13g1667 1295 Gene3D Ribonuclease Inhibitor 140 871 IPR032675 -
Glsi13g1667 1295 FunFam Brassinosteroid LRR receptor kinase 226 705 - -
Glsi13g1667 1295 Gene3D Transferase(Phosphotransferase) domain 1 1058 1259 - -
Glsi13g1667 1295 Pfam Leucine rich repeat 593 650 IPR001611 GO:0005515
Glsi13g1667 1295 Pfam Leucine rich repeat 327 385 IPR001611 GO:0005515
Glsi13g1667 1295 Pfam Leucine rich repeat 421 480 IPR001611 GO:0005515
Glsi13g1667 1295 CDD STKc_IRAK 988 1257 - -
Glsi13g1667 1295 Gene3D - 693 753 - -
Glsi13g1667 1295 SUPERFAMILY L domain-like 749 872 - -
Glsi13g1667 1295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1104 1116 IPR008271 GO:0004672|GO:0006468
Glsi13g1667 1295 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 396 1253 - -
Glsi13g1667 1295 ProSiteProfiles Protein kinase domain profile. 982 1257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1667 1295 SUPERFAMILY Protein kinase-like (PK-like) 968 1259 IPR011009 -
Glsi13g1667 1295 Pfam Leucine Rich Repeat 520 542 IPR001611 GO:0005515
Glsi13g1667 1295 FunFam serine/threonine-protein kinase BRI1-like 2 941 1057 - -
Glsi13g1667 1295 SMART LRR_typ_2 520 542 IPR003591 -
Glsi13g1667 1295 SMART LRR_typ_2 418 442 IPR003591 -
Glsi13g1667 1295 SMART LRR_typ_2 590 614 IPR003591 -
Glsi13g1667 1295 SMART LRR_typ_2 802 825 IPR003591 -
Glsi13g1667 1295 SMART LRR_typ_2 663 686 IPR003591 -
Glsi13g1667 1295 SMART LRR_typ_2 826 849 IPR003591 -
Glsi13g1667 1295 SMART LRR_typ_2 325 348 IPR003591 -
Glsi13g1667 1295 SMART LRR_typ_2 638 662 IPR003591 -
Glsi13g1667 1295 SMART LRR_typ_2 492 516 IPR003591 -
Glsi13g1667 1295 SUPERFAMILY L domain-like 159 481 - -
Glsi13g1667 1295 Pfam Protein kinase domain 982 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1667 1295 Gene3D Phosphorylase Kinase; domain 1 946 1057 - -
Glsi13g1667 1295 ProSiteProfiles Leucine-rich repeat profile. 327 349 IPR001611 GO:0005515
Glsi13g1667 1295 SMART serkin_6 982 1254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1667 1295 FunFam Brassinosteroid LRR receptor kinase 1058 1259 - -
Glsi13g1667 1295 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 751 871 - -
Glsi13g1667 1295 PRINTS Leucine-rich repeat signature 422 435 - -
Glsi13g1667 1295 PRINTS Leucine-rich repeat signature 492 505 - -
Glsi13g1667 1295 SUPERFAMILY RNI-like 396 685 - -
Glsi13g1667 1295 Pfam Brassinosteroid receptor island domain 688 752 IPR045381 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1667 Glsi-ChrGlsi13 33127638 33134436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1667 125 1291 Receptor kinase-like Gene Family AT4G39400 68.707 0.0 1553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Glsi13g1667 Pkinase 9.9e-45 CL0016