Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1663 ATGGGGTGCGTTAACGGCAAGTACTCTCCCAATAGCAACTCTCAGAGGTTAAAAGAGGATAATGGGCACGCTAAGATAGGTAGTGCAGCGCCGAAACCAATAGGCCGCACCCAGAATAGTTTGAGGACAAATTCCGAGAAGAAGGTGGGATTGGAGTTGGATACGAAGACACAGAGAGGAGGCGCGAATTCCGGTGCTGTTGTAACAGTAGAAGTAGGTGGAGAAAGGGCGATTGCTGGAGAACAAAAGAATGAGGTTGGGAGTGTTTCCACGAGATTTGTGGAGAAGAAGATTGGAAGAGATGAATATGTGGACGGGTGGCCAAAGTGGCTGGTTGATAATATACCTGGAAAAGTTTTGGCTACTCTAGTTCCCAAGAGCGCTGATTCTTACGAAAAACTTGCCAAGGTAGGACGAGGAACATATAGCAATGTGTACAAAGCTCGAGATAAGGAGACAGGAAAGATTGTTGCTTTGAAGAAGGTGCGTTTTGACACGTCGGATTCTGAAAGTATCAAATTTATGGCAAGAGAGATCATGATACTGCAGAAGCTGGATCATCCCAATGTGATCAAGCTTGAAGGATTAGCAACATCAAGGATGCAGTATAGCCTTTATCTAGTTTTGGATTTCATGCAGTCAGACCTAACCCGAATTATCCTCCGCCCTGGGGAGAGTCTCACCGAAGCACAGATAAAGCGGTATATGCAGCAACTGCTTTCTGGCCTCCAGCACTGCCATGAGAGGGGAGTTATGCACCGAGATATTAAAGCTTCAAACTTGTTAATAGACAAGAAAGGGGTGCTGAAAATTGGAGATTTTGGGCTTGCAAATTCCTTCGATCTTAAACCTAAGGGGCCTCTTACAAATCGAGTGGTGACACTCTGGTATAGAGCTCCTGAACTACTTTTAGGTTCAACAGATTACGGATTTGGCATTGATCTCTGGAGTGCTGGATGCCTATTGGCTGAGATGTTCGTTGGAAAGCCACTTATGCCTGGCAGGACAGAGGTTGAACAGCTTCACAAGATCTTCAAAATTTGTGGTTCTCCTTCGGATGATTACTGGAAAAAATTGAAGCTAATGACAAGCTACAGGCCACCACATTACAAACCTAATTATGAAGAAGTCTTCCGGGGTTTTCCTTCCTCTTCTCTTGGCCTCTTGACTACACTTCTTGATCTCGACCCTAACAATCGTGGCACTGCTGCGTCTGCTCTTCAAAGTGAATTCTTCGAGACTAGTCCATTACCATGCGACATTTCAGCGTTACCAGTAATATACAAAGATGAGGATGAGCGCTCACAAACTAGAAGACGCAAAAAGCATAAGGGTCTCAAGAAAGGGCAATTATCAAAAACAAGTAATGCAAGTCGAACCGCTGGACAACCCAGGAGAAATTCAGAATCGTCAAAAGAGAAGAAGAATGTGAAACCAAGCACGCTTGATCTAGAAATGGGGAATAGTACAGGCAGCACGCCGTCCGGCTCAAAAGTATTTACGATCGAAGGGAGCTTGAATGCATCTCTGTCCCCCATTTCTGTCTCCAGTAAGAAAAAATCCCCCGGAACTGAAGGACATCCTAATGCTCTTAAGAACATGAAGAACAACAGCAACATGTTACAGGCCTCTATAATAGATGTGATCAATCGCAACGAAGGCAATGATTTAGCTCAATTTCGCAGGTCCTTTTCTGCGTTGGATTTCCGAGTTGATCCAGACAAGTTATCAGATCTCTATGAATTAAATAAAAAATTGGGCTATTAA 1767 0.4414 MGCVNGKYSPNSNSQRLKEDNGHAKIGSAAPKPIGRTQNSLRTNSEKKVGLELDTKTQRGGANSGAVVTVEVGGERAIAGEQKNEVGSVSTRFVEKKIGRDEYVDGWPKWLVDNIPGKVLATLVPKSADSYEKLAKVGRGTYSNVYKARDKETGKIVALKKVRFDTSDSESIKFMAREIMILQKLDHPNVIKLEGLATSRMQYSLYLVLDFMQSDLTRIILRPGESLTEAQIKRYMQQLLSGLQHCHERGVMHRDIKASNLLIDKKGVLKIGDFGLANSFDLKPKGPLTNRVVTLWYRAPELLLGSTDYGFGIDLWSAGCLLAEMFVGKPLMPGRTEVEQLHKIFKICGSPSDDYWKKLKLMTSYRPPHYKPNYEEVFRGFPSSSLGLLTTLLDLDPNNRGTAASALQSEFFETSPLPCDISALPVIYKDEDERSQTRRRKKHKGLKKGQLSKTSNASRTAGQPRRNSESSKEKKNVKPSTLDLEMGNSTGSTPSGSKVFTIEGSLNASLSPISVSSKKKSPGTEGHPNALKNMKNNSNMLQASIIDVINRNEGNDLAQFRRSFSALDFRVDPDKLSDLYELNKKLGY 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1663 588 SUPERFAMILY Protein kinase-like (PK-like) 125 419 IPR011009 -
Glsi13g1663 588 Gene3D Phosphorylase Kinase; domain 1 120 213 - -
Glsi13g1663 588 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Glsi13g1663 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Glsi13g1663 588 MobiDBLite consensus disorder prediction 431 535 - -
Glsi13g1663 588 MobiDBLite consensus disorder prediction 482 523 - -
Glsi13g1663 588 MobiDBLite consensus disorder prediction 1 63 - -
Glsi13g1663 588 PANTHER CELL DIVISION PROTEIN KINASE 129 418 - -
Glsi13g1663 588 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Glsi13g1663 588 MobiDBLite consensus disorder prediction 466 480 - -
Glsi13g1663 588 MobiDBLite consensus disorder prediction 450 465 - -
Glsi13g1663 588 Pfam Protein kinase domain 131 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1663 588 ProSiteProfiles Protein kinase domain profile. 131 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1663 588 MobiDBLite consensus disorder prediction 1 17 - -
Glsi13g1663 588 FunFam Putative serine/threonine-protein kinase 214 450 - -
Glsi13g1663 588 SMART serkin_6 131 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1663 588 Gene3D Transferase(Phosphotransferase) domain 1 214 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1663 Glsi-ChrGlsi13 33115376 33118449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1663 126 481 Core Cell Cycle Gene Families AT5G10270 41.495 9.56e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi13g1663 Pkinase 8.2e-71 CL0016