Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1629 ATGACTATTAACTTAGGAAGGGTGCGCAAAGTGCACGTTGGCATATCCAATCACCGATATCCACCTCACAGCACTCAGGTACTTTCCAGGGAAGATACCAAGACCTTGGAACGCTGCAGAGCTATGAGTAGAAGAGAGGCAGATGGCCCAATCAAGGCTATGACAGTGATTGCTGAATACACAGGCTATGTGTATTACATTAAGAATCGAGAACATGATGATTGTGACAGTATGATGACCCTTTTTTTAGTAATGGATTCCTCTAGAAGTCTTGTCATCTGCCCTGATAAACGTGGAAACACTGCTCGCTTTATTAATGGCATCATCAACAATCATACTTAGGAAGGTAGCAAGAAGCAGAATTGTAAATGTGCGAGGTACAGTGTTAATGGTGAATGCAGGGTCTTCTTGGTTGCTACTCGTGATATTTCTAAGGGAGAGAGGCTTTATTATGATTATAACGATTATGAGCATGAATATTCTACTTATAACTTCGTTTAA 501 0.4072 MTINLGRVRKVHVGISNHRYPPHSTQVLSREDTKTLERCRAMSRREADGPIKAMTVIAEYTGYVYYIKNREHDDCDSMMTLFLVMDSSRSLVICPDKRGNTARFINGIINNHTXEGSKKQNCKCARYSVNGECRVFLVATRDISKGERLYYDYNDYEHEYSTYNFV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1629 166 Gene3D SET domain 8 166 IPR046341 -
Glsi13g1629 166 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 47 163 - -
Glsi13g1629 166 Pfam SET domain 78 154 IPR001214 GO:0005515
Glsi13g1629 166 ProSiteProfiles SET domain profile. 34 154 IPR001214 GO:0005515
Glsi13g1629 166 SUPERFAMILY SET domain 48 155 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1629 Glsi-ChrGlsi13 32876395 32878856 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi13g1629 SET 2.6e-07 No_clan