Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1598 ATGCAAACAACCTATTCAATGAAGAAACAAGGGTGTGAGGTAGAAGCAATAGGCATCAACTACAAGATCTGCACACAGAAAAACGAGCACCCTTTTAATATCTTCGGCAAATCTCCACAACTGCATAATGAAGAAGGTCAAGAACCAGAAGAGGAAGCAGAAGCTGGACAAACATGCAGAGGAATCCGGCATGTCCTCAAGAACGTGAACTGCCGCGCCATGCCGTGGGAAATTCTCGCCATTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTTGAGATTCTTGCTGGTAAAGTTACTCCACAAATTGGGTCTATCTTAGTGAACCAGAGGCCTGCAGATAAAGCTCAGTTCAGGAAGATTTCAGGGTATGTTACACAAAAGGATACTCTGTTTCCCTTACTTACGGTTGAAGAAACTTTGATGTTTAGTGCAAAGCTGAGGCTAAAGCTTCCTCAAGAGCAACTCTACTCCAGGGTCAAGTCACTGATTCAGGAGCTAGGACTTAGCCACGTTGCTGGGACTAGAATTGGAGATGACAGGGACCGTGGGATATCTGGTGGCGAGAGGCGCCGAGTTTCTATTGGTGTTGAAGTCATACACGATCCAAAAGTGCTGATTCTGGATGAACCAACTTCTGGGCTTGACAGTACCTCTGCGCTGCAAATCATTGATATGCTCAAGGTCATGGCTGACTCCAGGGGCCGAACTATAATCCTTAGTATCCATCAACCTGGGTTCAGAATAGTGAAGTTATTCAATTCCATGTTGTTGTTAGCCAATGGCTGTGTGTTACACCACGGCACTGTGGATTTGCTGGGTGTGAATCTAAGATTAATGGGCTTAGAGCTTCCTCTTCACGTTAATGTAGTTGAATATGCCATTGAATCCATAGAAACCATTCAGCAACAGCAAAAATGCCACCAAGTTCAGCTGGAAACGCCACCACAATTGCTAGTAACAATGCAACAAAAGAAAAGTGAAGATCAAGGTGAGGGTAGAAGTGGTAAGTTTACTCTGCAACAGCTCTTTCAACAATCCAAGGTAATTAATGAACAAATCATAGACGAGGGAATTGATTTCACTAGTGATTTTCCAAATTCTAGATTGAGAGAAACTATGATTCTCACTCATAGGTTCTCCAAAAATATTTTTCGTACAAAGGAGCTCTTCGCATGTAGAACGATTCAGATGCTGATTTCCGGGCTCATTTTGGGCTCCATCTTTTGTAACCTCAAGGATGATTTAGTCGGAGCTGCAGAACTTGTGGGTCTATTTGCTTTCATACTAACATTTTTGTTATCAAGCACCATAGAAGCTCTGCCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACCTCTTGTGGAAGCTACAGAGTATCATCCTATGCTATTGCCAATGGCCTTGTTTACTTGCCATTTCTACTCATCCTAGCCATTTTATTCACAATACCCTTATACTGGCTTGTCGGGCTCAACCGGAATTTCACAGCATTTCTGCACTTTCTGTTGCTAATTTGGTTAATTCTTTATACGGCAAATTCAGTTGTGGTATGTTTTAGTGCTCTGGTGCCTAATTTTATTGTTGGGAACTCTGTGATTGCTGGTGTCATGGGATCATTCTTCTTGTTCTCTGGGTACTTCATATCAAAGAATGAAATCCCGAATTACTGGATTTTCATGCATTATATTTCTCTGTTTAAGTATCCCTTCGAAGGGTTTCTGATAAATGAGTTCTCCAACTCAAGAAAGTGCTTGCAGTATATGTTTGGGGCATGTATGGTGACTGGGGAGAGTGTGCTCAAAGAAGAAGGATATGGGGAAGAAAGTAGTAGATGGAAGAATGTGGGGGTCATGGTGTGCTTCATCTTGGTTTACAGGTTCATTTCTTATGTAATTCTTAGATGTAGATGCTCACAGAGGGGAATAAAGAGTGTCATCATCTGA 1956 0.4228 MQTTYSMKKQGCEVEAIGINYKICTQKNEHPFNIFGKSPQLHNEEGQEPEEEAEAGQTCRGIRHVLKNVNCRAMPWEILAIVGPSGAGKSSLLEILAGKVTPQIGSILVNQRPADKAQFRKISGYVTQKDTLFPLLTVEETLMFSAKLRLKLPQEQLYSRVKSLIQELGLSHVAGTRIGDDRDRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADSRGRTIILSIHQPGFRIVKLFNSMLLLANGCVLHHGTVDLLGVNLRLMGLELPLHVNVVEYAIESIETIQQQQKCHQVQLETPPQLLVTMQQKKSEDQGEGRSGKFTLQQLFQQSKVINEQIIDEGIDFTSDFPNSRLRETMILTHRFSKNIFRTKELFACRTIQMLISGLILGSIFCNLKDDLVGAAELVGLFAFILTFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTIPLYWLVGLNRNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVMGSFFLFSGYFISKNEIPNYWIFMHYISLFKYPFEGFLINEFSNSRKCLQYMFGACMVTGESVLKEEGYGEESSRWKNVGVMVCFILVYRFISYVILRCRCSQRGIKSVII 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1598 651 Pfam ABC-2 type transporter 244 328 IPR043926 GO:0140359
Glsi13g1598 651 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524|GO:0016887
Glsi13g1598 651 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 287 IPR003439 GO:0005524
Glsi13g1598 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 273 IPR027417 -
Glsi13g1598 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 632 - -
Glsi13g1598 651 FunFam ABC transporter G family member 5 51 311 - -
Glsi13g1598 651 Pfam ABC transporter 66 214 IPR003439 GO:0005524
Glsi13g1598 651 Pfam ABC-2 type transporter 374 582 IPR013525 GO:0016020|GO:0140359
Glsi13g1598 651 Gene3D - 55 308 IPR027417 -
Glsi13g1598 651 SMART AAA_5 75 272 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1598 Glsi-ChrGlsi13 32678996 32680951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1598 71 298 Calmodulin-binding Proteins AT2G36910 25.523 2.99e-11 65.1