Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1525 ATGGACAGGGCACGATTCGGGCTTTTCTTCTTGCTGCTTATTCTCCTTGGTTCTCAAGAGATGGTAGTTCAGAGCGAGGCAAGACACTGTGAGTCAAAGAGCCATCGGTTTAAAGGGTTGTGTGCGAGCGACCACAACTGCGCATCGGTTTGCCTTGTGGAAGGTTTCACCGGTGGCAAATGCCGAGGTTTCCGTCAACGCTGCTTTTGCACCAAGCTTGGTCGTTTCAGCGACCAAGCTAGCTTTACGCTTGTAGCCTGCTGTGCTTTCGTTATTGTTTTTGCCATCAAGAAGTAA 297 0.4983 MDRARFGLFFLLLILLGSQEMVVQSEARHCESKSHRFKGLCASDHNCASVCLVEGFTGGKCRGFRQRCFCTKLGRFSDQASFTLVACCAFVIVFAIKK 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1525 98 Gene3D - 28 73 IPR036574 -
Glsi13g1525 98 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Glsi13g1525 98 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Glsi13g1525 98 SMART gth_4 29 74 IPR003614 GO:0006952
Glsi13g1525 98 CDD Knot1 39 71 IPR003614 GO:0006952
Glsi13g1525 98 Pfam Gamma-thionin family 28 72 - -
Glsi13g1525 98 PANTHER DEFENSIN-LIKE PROTEIN 1 7 71 - -
Glsi13g1525 98 SUPERFAMILY Scorpion toxin-like 28 72 IPR036574 -
Glsi13g1525 98 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1525 Glsi-ChrGlsi13 31962143 31962673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1525 1 73 Plant Defensins Gene Families AT5G63660 56.164 9.13e-25 87.0