Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1492 ATGGACAAGTTAAATTTTGTTAAAAATGGAGCGAGCAGATTGCCTCCTGGGTTTCGATTCCAGCCAACGGACGAAGAGCTTGTGTTTCAGTACCTGAAATGCAAGGTACTGTCGTGCCCCTTGCCTGCTTCTATCATTCCTGAAATCAATGTCTGCGACTACGATCCTTGGGATTTGCCAGGTAATTGCGATGAGCAGGAGAGGTACTTCTTTAGTTCTAAAGAAGCAAAATATCGAAATGGTAATCGCATGAACCGAACAACCAGCTCTGGATATTGGAAGGCAACTGGTTCAGACAAGAGAATCTCATCTCCCCCAACAAATAATGGTTTTGGTGGGATAAGAAAAAGCTTGGTTTTTTATCAAGGCAAAGCTCCAAATGGGTCTAGAACTAATTGGGTCATGCGCGAATATCGCCTGGTCACTGCAGAAACTAGTGCTTTCAAGAACTATGTTAGGGAGATAGGAGATTGGGTTCTGTGTCGCATATATATGAAGAGCAGAACAGAAAGTAGTGGTGGTGACATGCAGAAGCGAGACACAGTAATGAATGTTGATGAGGTGTCTCTGCCAAGATTCTTTGATTTTATGATGGTACACAAGACAATACCAGCTGCTCCACGCCATTCTTGTACATCCTCGTCTTGTTCAAGTTCCACTGGCATCATAAGTGTGGCGGATCACGAAGAAACAAGTGCCTCTACTACTGACTTTTAA 717 0.4351 MDKLNFVKNGASRLPPGFRFQPTDEELVFQYLKCKVLSCPLPASIIPEINVCDYDPWDLPGNCDEQERYFFSSKEAKYRNGNRMNRTTSSGYWKATGSDKRISSPPTNNGFGGIRKSLVFYQGKAPNGSRTNWVMREYRLVTAETSAFKNYVREIGDWVLCRIYMKSRTESSGGDMQKRDTVMNVDEVSLPRFFDFMMVHKTIPAAPRHSCTSSSCSSSTGIISVADHEETSASTTDF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1492 238 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Glsi13g1492 238 SUPERFAMILY NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
Glsi13g1492 238 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Glsi13g1492 238 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 200 - -
Glsi13g1492 238 ProSiteProfiles NAC domain profile. 14 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1492 Glsi-ChrGlsi13 31776531 31777409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1492 1 233 NAC Transcription Factor Family AT5G13180 48.617 2.39e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi13g1492 NAM 2.9e-32 No_clan