Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1482 ATGTTGCCTGACATAAATTGTGAATCTGCAGATGGACCTCGCTTTCCCCTTTCTCTCACTGTCAAATTTGAGGCATCACTTCTCGGATTCGGGCCGCGCTGCGCTGACTATGCTGTCACTGGGTCACCAATGGAGGATGGCAGACAACATGAAAACAGTAGGCAAAAGATGGACTACTACAGAGGAGCACATTCCCTGTGGAGTATGGCTCCCCCACATCAGGTAAAGGAACCAAATGCCTTAGTTATGAATAAGAAAATTATGTCCATTATGGCTGAGAGGGAGGCTGCCATTCGAGAACGAAATGCAGCTTTATCTGAAAAGAATGAAGCCTTGGCAGCTCGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTGCCCAAAGGGATAATGCCCTAGTGGAACGGGACAATGCCCTTGCTGCTCTTCAAATCCAGGACAATGCTGTCAACTTCTCATTGGGTAGTGGAATTCAACGTGGATCAAAGCGGATGCACCATTCCTCAAATTATTTAGGTCACATGCCAGAAGCTGCCTACAACACAAAGGATTTGGCAATATCTGATGCCTTCCCAGTAACTGTTATAGCTTCTGAAGCAGTCAAATCTCATCAGGCTAAGAGAACGAAGGAGAACAAGGCAATTTGTCCCAAGGCATCAAAGACGCCTAGCAAAGGAAAGAAAGTGAGTGAGGATTTAAATAGGCAGGCTACTTCGGAAGGGACAAAGATCAAATCAGAGTGGGATAGGCAGGATGTTGGCCTGAAATTGGTTACATTTGATGAAACTTCCATGCAAGTCCCAGTTTGCACATGCACTGGAGTACCACGGCAATGCTACAAATGGGGGAATGGTGGATGGCAGTCATCTTGTTGTACCACCACCTTGTCAATGCATCCACTACCACAGCTTCCTAACAAGCGCCATGCGAGAATTGGGGGGCGAAAGATGAGTGGAAGTGTCTTTACGAGACTGCTTAGTAGGTTGGCCGCAGAAGGCCGTGATTTATCGATACCATTGGATCTCAAGGACTACTGGGCCAGGCATGGAACAAATCGCTACATCACCATCAAGTAG 1077 0.4745 MLPDINCESADGPRFPLSLTVKFEASLLGFGPRCADYAVTGSPMEDGRQHENSRQKMDYYRGAHSLWSMAPPHQVKEPNALVMNKKIMSIMAEREAAIRERNAALSEKNEALAARDEALRQRDEALAQRDNALVERDNALAALQIQDNAVNFSLGSGIQRGSKRMHHSSNYLGHMPEAAYNTKDLAISDAFPVTVIASEAVKSHQAKRTKENKAICPKASKTPSKGKKVSEDLNRQATSEGTKIKSEWDRQDVGLKLVTFDETSMQVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGSVFTRLLSRLAAEGRDLSIPLDLKDYWARHGTNRYITIK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1482 358 PANTHER - 64 358 IPR010409 -
Glsi13g1482 358 Pfam GAGA binding protein-like family 56 358 IPR010409 -
Glsi13g1482 358 MobiDBLite consensus disorder prediction 208 243 - -
Glsi13g1482 358 SMART GAGA_bind_2 44 358 IPR010409 -
Glsi13g1482 358 Coils Coil 102 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1482 Glsi-ChrGlsi13 31555206 31559866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1482 44 358 BBR or BPC Transcription factor family AT2G21240 59.306 7.37e-132 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Glsi13g1482 GAGA_bind 1e-98 No_clan