Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1478 ATGGCGCTCTCCAACGAATCACGCCAGTCTCTCGTGCCCGGATTTCTGTACTCATCACCATCATCAAAAGGACTCTTCCAATTGGATACGTCGATGAAGGCCGATCATGGGTTCCCACCAGCAACGACGTCGTCCATTGTGTCAAATTCATCGCCGCCGCCACCAGGAAGGAACTTTTTGATCCCCGCACCGACAGAGAAAATCGCCATGTTTTCTCCGGCTTACTACGCAGCATGTACAGGCGGTGGGATCCTCAGCTGTGGCCTCACCCACATGGCAGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGACCCAGCAAAGTATAAGAGCATAGCATCAGGATTTGGAGTATTACTGAAGGAGCAGGGTGTGAAAGGATTCTTTAGGGGGTGGGTGCCGACATTGCTCGGTTACAGTGCTCAGGGAGCGTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAAACATACTCAGATATTGCTGGGCCGGAATATGCAGCCAAGTATAAAACATTGATATTCCTAGCTGGTTCCGCTTCAGCAGAGGTGATTGCTGATATTGCCCTTTGCCCTATGGAGGCAGTCAAAGTTCGTGTACAAACTCAGCCAGGCTTTGCTCGAGGCTTGGCCGACGGGCTCCCCAAGTTCGTGAAGGCTGAGGGTGCTTCTGGGTTGTACAAAGGGCTTGTTCCTCTTTGGGGTCGTCAGATTCCATATACGATGATGAAATTTGCTTCATTTGAGACTGTTGTGGAAATGATGTACAAATACGCGATTCCTACACCGAAGGAGCAGTGTAGCAAAAATCTGCAGCTGGGAGTAAGTTTTGCAGCAGGATATGTGGCTGGCGTGTTTTGTGCGATTGTCTCACACCCTGCTGACAACCTCGTTTCTTTTCTCAACAATGCCAAGGGAGCCACGGTTGGCGATGCTGTGAATAAGTTGGGGCTATGGGGACTATTCACTCGGGGCCTCCCACTTCGTATCGTTATGATTGGCACGCTAACTGGAGCTCAGTGGGGAATATATGATGCTTTTAAAGTATTTGTAGGCCTGCCTACTACTGGTGGAAGTACTCCTGCTCCTGCTCCTGCTCCTGCTGCCACACAGGTTGCCAAGGCATGA 1131 0.5013 MALSNESRQSLVPGFLYSSPSSKGLFQLDTSMKADHGFPPATTSSIVSNSSPPPPGRNFLIPAPTEKIAMFSPAYYAACTGGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSIASGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKTYSDIAGPEYAAKYKTLIFLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLADGLPKFVKAEGASGLYKGLVPLWGRQIPYTMMKFASFETVVEMMYKYAIPTPKEQCSKNLQLGVSFAAGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVNKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGSTPAPAPAPAATQVAKA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1478 376 FunFam Phosphate carrier protein, mitochondrial 74 352 - -
Glsi13g1478 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 158 IPR018108 -
Glsi13g1478 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
Glsi13g1478 376 Gene3D Mitochondrial carrier domain 78 352 IPR023395 -
Glsi13g1478 376 SUPERFAMILY Mitochondrial carrier 76 347 IPR023395 -
Glsi13g1478 376 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 63 361 IPR044677 GO:0005315|GO:1990547
Glsi13g1478 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 351 IPR018108 -
Glsi13g1478 376 Pfam Mitochondrial carrier protein 81 160 IPR018108 -
Glsi13g1478 376 Pfam Mitochondrial carrier protein 178 259 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1478 Glsi-ChrGlsi13 31524297 31526135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1478 8 372 Chloroplast and Mitochondria Gene Families AT5G14040 78.108 0.0 572