Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1475 ATGAACTGGACAACATGGAAGACTATGGCTATGGCTGTAGTGTTGCTGCGGCTGAGCTTTCCCTTGGAGGTTTTCTGTCTCTCTTCTCATGCAGATAGGATTGTTCGGCTTCCTGGACAACCCCACGTAGCCTTCCAACATTTCTCAGGATATATTACAGTGGATGACAAGAAACACAAGGCACTCTTCTACTATTTTGTTGAATCAGAAACTGATCCGGCTTCAAAGCCTCTGGTTCTCTGGCTTAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTAGGAGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGGGAAGTTCTGATTAGAAATGAGCATAGCTGGAACAGAGAGGCAAACATGTTATATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTTTATGACAGTGAACGACGAGTCAACTGCCAGGGACAATCTTATATTCCTGCAACTCTGGTTCAACGAGTTCCCCCAATACAGGCAGAGAGATTTGTTTCTAACAGGGGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTAACATCAACAAGAAGGAGAAGATATTTAATCTTAAAGGCATAGCCTTGGGTAACCCAGTTCTAGAATACGCCACAGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCACGGATTGATATCAGATTCAACGTACAAAATGTTCACCACAGAATGTAATTATTCTCGGTATGTTAGTGAATACTATAGAGACTCAGTTTCGCCTCTTTGCTCAAAGGTTATGGGACAAGTAAGTAGAGAAACCAGTAAATTTGTGGACAATTACGATGTCACCCTCGATGTCTGCATTTCTTCAGTGCTTTCACAATCCAAGGTTATTTGTCCTCAAACCCAGCAAGCAAATGAGAGGATAGATGTATGTGTGGATGACAAAGTTACAAATTACTTAAACCGAAGAGATGTGCAGGAGGCACTTCATGCCAAACTTGTTGGAGTTCGCAAGTGGGATGTGTGCAGCAAAATCTTGGATTACGATATGCTCAACGTGGAATTACCTACACTCCCTGTTGTTGGATCACTCGTAAAAGCTGGAGTTCAGGTCTTAATTTATAGTGGAGATCAAGATTCTGTAATTCCACTGACTGGGAGCCGCATCTTGGTACAGAAGTTGGCAAGGAAATTAGGACTGAATACTACAATACCTTACAGAGTGTGGTTTGAAGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGAAATATCCTGTCATTTGCCACCGTCAGAGGTGCCTCCCATGAAGTTCCTTTCTCGCAGCCTGAGAGATCACTAGTGCTATTCAAGTCATTCTTGGAAGGCATGCCTCTACCTGACACACTGTTTTAG 1401 0.4354 MNWTTWKTMAMAVVLLRLSFPLEVFCLSSHADRIVRLPGQPHVAFQHFSGYITVDDKKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIRNEHSWNREANMLYLETPVGVGFSYAKGGSSFMTVNDESTARDNLIFLQLWFNEFPQYRQRDLFLTGESYAGHYVPQLAKLMININKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTTECNYSRYVSEYYRDSVSPLCSKVMGQVSRETSKFVDNYDVTLDVCISSVLSQSKVICPQTQQANERIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSKILDYDMLNVELPTLPVVGSLVKAGVQVLIYSGDQDSVIPLTGSRILVQKLARKLGLNTTIPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGMPLPDTLF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1475 466 Gene3D - 359 458 - -
Glsi13g1475 466 FunFam Carboxypeptidase 27 462 - -
Glsi13g1475 466 SUPERFAMILY alpha/beta-Hydrolases 36 462 IPR029058 -
Glsi13g1475 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 445 IPR001563 GO:0004185|GO:0006508
Glsi13g1475 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Glsi13g1475 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Glsi13g1475 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Glsi13g1475 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Glsi13g1475 466 FunFam Carboxypeptidase 359 458 - -
Glsi13g1475 466 Gene3D - 313 349 - -
Glsi13g1475 466 Gene3D alpha/beta hydrolase 29 290 IPR029058 -
Glsi13g1475 466 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Glsi13g1475 466 Pfam Serine carboxypeptidase 39 458 IPR001563 GO:0004185|GO:0006508
Glsi13g1475 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1475 Glsi-ChrGlsi13 31505066 31507909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1475 321 461 Calmodulin-binding Proteins AT2G22960 27.660 2.83e-15 72.4