Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1464 ATGGCATCAGAATCAGAGAAAATATGTGAAGGCACTAATTCTCCACCTGCTCCAGTTGAAAGGCATCAAACAGAGGTTGATGTACCCAGCAATGAAAGAACCAAATTGACAAGACACCCTCGATGGACCAGACAGGAAACGATTATCCTTATAGAGGCCAAGAAAGTGGTTGAGAATGGGGGGAAATCTGTTTGTCGGTACACTACTCCGTCTGAACCAAAATGGGATTTAGTCTCATCGCTCTGTCATAGACAGGGTGTGAACAGAGGTCCTGTCCAGTGTCGAAAGAGATGGAGCAACCTTCTTAGCGATTTCAAGAAGATTAAGAAGTGGGAGTCAAATATAAAGGAAGAGGGTGAATCATTCTGGGTGATGAGAAATGACGAGAAGAAAGAAAGGAAGTTGCCAGGTTTCTTTGATGGGGAGGTGTACAACGTATTAGATGGAGGGGTATGCACTGCTGCAGCATTTCCGTTGGCGCTAATTAAAATGACATCAAAGGAAGAAAATGCTAATGGAGTTGCTGCAGAGGCCTCAGAGCAATGCGAGGAGGAGGAGGAAGAAGCTGAGGCCATTGTTGACAGTGAGAAAATGGGTTGGAGCACAGAGGAGGAGACCATCACGACTGGGAAGAAAGTCACAGAGCCGTTGATTGTATCAGTTGTTAAAGAAACAAATACAATCATGAGAGGAAATCCCAAAAAGACGTCTACTCATCCACTGCCTAGTTCAGTACATGAAGAACCCGAGCATTTACTTTCATTGAAATCTCGAGGAAGTAACATAGGTTCAGGCAAAAGGGGTGAATCTATGTCCCAAGAGGGGTGCAAGAGAAGGCGACTGTCACCAGACAATTGTGAGGACCACACAAATTTCAGCAATCCGTTAATTAAAGTACTAAGGAGGAATGGTAACATACTGAAAGCCCACCTTGGAGATCAAAACATAAATTACCAACTGGCCAGGGATCAGCAGAAGGAGCAGACAGACAACGTAGTTGCTGCACTTGGCAAGCTCACAGATGCTTTGATAAAAATTGCCGAAAAGTTATGA 1053 0.4435 MASESEKICEGTNSPPAPVERHQTEVDVPSNERTKLTRHPRWTRQETIILIEAKKVVENGGKSVCRYTTPSEPKWDLVSSLCHRQGVNRGPVQCRKRWSNLLSDFKKIKKWESNIKEEGESFWVMRNDEKKERKLPGFFDGEVYNVLDGGVCTAAAFPLALIKMTSKEENANGVAAEASEQCEEEEEEAEAIVDSEKMGWSTEEETITTGKKVTEPLIVSVVKETNTIMRGNPKKTSTHPLPSSVHEEPEHLLSLKSRGSNIGSGKRGESMSQEGCKRRRLSPDNCEDHTNFSNPLIKVLRRNGNILKAHLGDQNINYQLARDQQKEQTDNVVAALGKLTDALIKIAEKL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1464 350 ProSiteProfiles Myb-like domain profile. 41 102 IPR001005 -
Glsi13g1464 350 Gene3D - 42 107 - -
Glsi13g1464 350 MobiDBLite consensus disorder prediction 256 282 - -
Glsi13g1464 350 MobiDBLite consensus disorder prediction 1 36 - -
Glsi13g1464 350 Pfam Myb/SANT-like DNA-binding domain 40 123 IPR044822 -
Glsi13g1464 350 MobiDBLite consensus disorder prediction 230 249 - -
Glsi13g1464 350 Coils Coil 168 195 - -
Glsi13g1464 350 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 21 350 - -
Glsi13g1464 350 SUPERFAMILY Homeodomain-like 39 110 IPR009057 -
Glsi13g1464 350 SMART sant 38 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1464 Glsi-ChrGlsi13 31434374 31436285 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi13g1464 Myb_DNA-bind_4 3.3e-11 CL0123