Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1459 ATGGATTCGGATCCATTCGCCACTAGCATAGTTAGGTGGCATCACCGCACTGTTCTTCCGACATCCACGGCTGACTACACCATGCCTCCGCCGGTGCCCGTGGACCTGGGAGGGCTAGGGGAGTTCTTCCAAGCTTATGGTATCAGATACTACACGACGGCCAAGATAGCAGAGCTTGGGTTCACAGTGAGTACGCTAGTGGACATGAAGGACGAGGAACTTGACGACATGATGAACGGCCTCTCTCACATTTTCCGTTGGGATCTGCTCGCTGGGGAGCGTTACGGAATCAAGGCTGCCGTGAGAGCGGAGCGAAGGCACATAGTCGACGAGAAGATGAACCGGCGCAACCCTCTCTCGGCGGACACCACAAACAACGCACTGGATGCTATGTCTCAAGAAGGATTATCCGAAGAGCCGGTAGTGCAACAAGAAAAGGAAGTGGTAGGAAGTGGGGGAGGGATCGCGTGGGACAGGAGGAAGAAGAAGCAGTGGAGTAGACGGAGGATGAGGATGAAGACAGGTCGTCATCATAATCATCATGAGAATGAGTATCCAAACGATGAGGAGGAAGAAGAAAACAATAACAGCGCAGGTGGTGATGGGGGCTGTGAGAGACAAAGAGAGCACCCATTCATAGTCACGGAGCCTGGGGAAGTTGCTCGTGGGAAGAAGAACGGCCTCGATTACCTTTTCCACCTCTACGAGCAATGCCGTGAGTTCTTGATCCAAGTCCAAAACATGGCCAAGGACCGCGGTGAGAAATGCCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCCAAGAAAGCTGGAGCGAGCTACATTAACAAGCCCAAAATGCGACACTACGTGCACTGCTACGCCTTGCACTGTCTGGACGAGGAGGCGTCGAATGAGCTGAGAAAGGGATTCAAGGAGAGAGGGGAGAACGTAGGGGCGTGGAGGCAAGCATGCTATAAGCCCCTTGTGGCCATTGCAGCACGTCAAGGATGGGACATTGATGCCATCTTCGATGCGCATCCGCGTCTTTCCATATGGTATGTGCCAACCAAGCTCCGTCAACTTTGTCACGTGGAGAGGAACTGTGCCGCCCCCGCTTCCAGCTCTCTCTCCGTCGCCACTGCTCACCTCCCTTTCTAA 1143 0.5389 MDSDPFATSIVRWHHRTVLPTSTADYTMPPPVPVDLGGLGEFFQAYGIRYYTTAKIAELGFTVSTLVDMKDEELDDMMNGLSHIFRWDLLAGERYGIKAAVRAERRHIVDEKMNRRNPLSADTTNNALDAMSQEGLSEEPVVQQEKEVVGSGGGIAWDRRKKKQWSRRRMRMKTGRHHNHHENEYPNDEEEEENNNSAGGDGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNMAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNELRKGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFDAHPRLSIWYVPTKLRQLCHVERNCAAPASSSLSVATAHLPF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1459 380 Gene3D Protein LEAFY 202 371 IPR038276 -
Glsi13g1459 380 MobiDBLite consensus disorder prediction 133 206 - -
Glsi13g1459 380 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 199 365 IPR035209 GO:0003677
Glsi13g1459 380 PANTHER PROTEIN LEAFY 33 379 IPR002910 GO:0003677|GO:0006355
Glsi13g1459 380 MobiDBLite consensus disorder prediction 161 176 - -
Glsi13g1459 380 Pfam Floricaula / Leafy protein SAM domain 36 112 IPR035079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1459 Glsi-ChrGlsi13 31396124 31397876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1459 1 362 Orphan Transcription Factor Family AT5G61850 61.637 2.60e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Glsi13g1459 C_LFY_FLO 8.4e-109 CL0123