Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1454 ATGGCGAATACAGAACGCTCAAACTTTAAGCTTGATGTAAAGCTAGGAGAACCAACTCGGGTTCCCCCTGCAGAGGAAACAGAAAAGGGCCTCTACTTCCTTTCGAACCTTGACCAGAACATAGCAGTTCCAGTACGCACCGTATATTGTTTTAAATCTGCTTCCAGAGGAAATGAGGATGCTGCGCTAGTTATCAAAAACGCCTTGTCAAAGATTCTGGTTCCTTATTACCCTATGGCAGGCAGGTTAACTATCAGCTCAGAAGGAAAGTTGATAGTGGATTGCACAGGCGAGGGTGCAGTATTCGTTGAGGCCGAAGCAAACTGTGGGATAGAGGAATTAGGGGACCTCACAAAGCCCGATCCTTCAACTCTTGGGAAACTGGTTTATGACATCCCTGGTGCACGCAACATACTTGAGATGCCTCTTATACTGGTTCAGGTGACAAAATTCAAATGCGGAGGATTCACTTTGGGGCTAAGCATGAACCACTGTATGAAAGATGGGTTATGTGCTATGCAATTCGTGAATGCATGGAGTGAGACTGCCAGAGGCTTGGACTTGAAGGTTCCACCATTTCTAGATCGAACCATACTCAAGGCGCGCAATCCTCCTCAAATAGAGTTCACACACCATGAATTTGCTGAGATTGAAGACATATCAGATGCCAGCAAGCTATACGACGAAGAAGAGATACTCTACAGGTCCTTTTGTTTTGATCCGGACAAGCTTGAGCTGCTTAAGAAAAAGGCCACGGAAGATGGGATTCTGGAGAAGTGCTCTACTTTCGAAGCCCTCTCAGCTTTTGTGTGGAGAGCTCGAACTGAAGCCTTAAGGATGCATCCTCATCAGAAAACAAAGCTGCTCTTTGCTGTTGATGGAAGGTCCAGATTCGAGCCTCCAATACCAGAGGGCTACTTTGGCAATGCTATTGTGTTGACAAATTCCTTGTGTGAGGCTGGTGAGTTATTGAAGAACCCACTATCATTCACTGTTGGGTTAATTCGCAAGGCAATTGAGATGGCCACAGATAGCTATATGAGATCGGCCATAGACTATTTTGAAGCAACAAGAGCCAGGCCTTCCCTAACAGCCACCCTTTTGATCACAACTTGGACTAGGTTATCTTTCCACACAACAGATTTCGGCTGGGGAGAACCTTTATGTTCTGGGCCTGTGACCTTGCCAGAGAAAGAGGTCATTTTGTTCCTAACACATGGTGAAGAAAGGAAAAACATAAATGTGCTTCTGGGTTTGCCAGCTTCTGCCATGGAAATTTTTGAAGCACTGATGCAGTTATGA 1302 0.4547 MANTERSNFKLDVKLGEPTRVPPAEETEKGLYFLSNLDQNIAVPVRTVYCFKSASRGNEDAALVIKNALSKILVPYYPMAGRLTISSEGKLIVDCTGEGAVFVEAEANCGIEELGDLTKPDPSTLGKLVYDIPGARNILEMPLILVQVTKFKCGGFTLGLSMNHCMKDGLCAMQFVNAWSETARGLDLKVPPFLDRTILKARNPPQIEFTHHEFAEIEDISDASKLYDEEEILYRSFCFDPDKLELLKKKATEDGILEKCSTFEALSAFVWRARTEALRMHPHQKTKLLFAVDGRSRFEPPIPEGYFGNAIVLTNSLCEAGELLKNPLSFTVGLIRKAIEMATDSYMRSAIDYFEATRARPSLTATLLITTWTRLSFHTTDFGWGEPLCSGPVTLPEKEVILFLTHGEERKNINVLLGLPASAMEIFEALMQL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1454 433 Gene3D - 218 432 IPR023213 -
Glsi13g1454 433 Gene3D - 8 216 IPR023213 -
Glsi13g1454 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 429 - -
Glsi13g1454 433 Pfam Transferase family 15 430 - -
Glsi13g1454 433 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Glsi13g1454 433 FunFam Tryptamine hydroxycinnamoyl transferase 218 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1454 Glsi-ChrGlsi13 31344563 31346110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1454 11 431 Monolignol Biosynthesis Gene Families AT5G48930 37.130 3.44e-93 286