Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1438 ATGCTGAGCATGCATAGGAGCATCTCCAAGTATCGTAGTGAAGTGGGACTACCCCAGTCAAATATCTATCGCTTTAGAACCACGGAGACTTGGAGGAGCGAAATCGATGAATTAAGGAGATCGGTTGGGAATTTGGAGGCGGGACTAAGGCATTTAGCAGGAGAGGATCTGTCATCATTGGGCATGAAAGAATTGAAACAACTAGAGCGACAATTGACGACTGGGATTCAACGCATCCATGTTGAAAAGAGACGCGTCCTTGCAGAAAACATGAACACTCTTAAAAGAAGGCTCAGAGAGCTGCGGGAGGAGAGTAGTCTTCTTCAGAAAAGATTGCAGTTATTGGAAGATGGCAGTGCGAGTTCCACAGATCGATACGATGCATTTGGAAAGAAATCCCGTAAGCTTCAAGGTGTATTAAGTCTCGGGGAACATGACCATATATGGCAGCATTATTGA 459 0.451 MLSMHRSISKYRSEVGLPQSNIYRFRTTETWRSEIDELRRSVGNLEAGLRHLAGEDLSSLGMKELKQLERQLTTGIQRIHVEKRRVLAENMNTLKRRLRELREESSLLQKRLQLLEDGSASSTDRYDAFGKKSRKLQGVLSLGEHDHIWQHY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1438 152 ProSiteProfiles K-box domain profile. 28 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
Glsi13g1438 152 Pfam K-box region 28 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
Glsi13g1438 152 Coils Coil 84 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1438 Glsi-ChrGlsi13 31255115 31256185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1438 18 113 MADS-box Gene Family AT1G69120 31.250 7.56e-12 58.5