Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1430 ATGGAATGTAATAAAGAGGATGCCATAAAGGCTAAAGAGCTCGCAGAGAAGAAGATTTTAGAGATGGACCTTGCTGGCGCAAAAAGATTTGCTTTAAAGGCTCAAGACTTGTATCCTGATCTCAATGGTCTTCCTCAACTGCTGACAACGCTTGAGGTTTATGTCTCTGCTGAAAAAAGAATAAATGGAGAAGTTGATTGGTATAGGGTCCTTGGGGTGGAACCCTTGGCTGATGACGAAACAATTCGAAGGCGTTATAGGAAACTGGCTTTAACTCTACACCCTGATAAAAACAAATCAGTAGGTGCAGAAGGGGCTTTTAAACTTATCTCTCAGGCATGGAGTTTATTGTCTGATAAGTCTAAGAGAATGTTCTATGACCAAAATTGCAATTTTAGGGGTATATATGAAGAAATTCCAGATGGGAGGCCTTCTGTACCAGCTGGGCAGAATGGTTTCTTCAATTTCTTTAATACTGCTAATTGGAAAGATAGAGACCCCAGGAGTGCTGTTCATCCAAATCCTGCTCCAACACCTCCCGTAACCTTGAAACTGACATTTTGGACTATGTGCAATTCTTGCAGGACACATTTTGAATACCATACAGTTTACATCAACTGCAATCTTCTTTGCCCACATTGCCGTAAGCTCTTTTTAGCCTTTGAGGCACCACCCCCACCTATATACCGGAATGCTTCATCCACTTTGAGAATGTCTCAGATGCAGCGTGAAAAATCTATCTTAAACCGAATGGAAAGAAACTGCTATGTTTCTGGAAGGACGCCAACTTCTGCTATCAACTCATCAGAAAAAATATATGAATCAGGTCCTTTCTCTATGCCAGGGGGTATTTCCAGTGTCCCGGCATCCACTTCGTTTGCTGGTGAATCTTTTAATAATGTTAGGATGTCATTTGAGCATTTGAAGAGAGGGTTTGAAGCTACAACACCTCCTGCCATGATGGAGGAGGCCCATTTTGGGAAAACTCACCCTGTTAAGACAACAGGTGCTGGTTCAGATTTTCAATCTTCTTATTTTGGTTCCAATTCTGTCTTGAAAGGACATAGGCCAAGGAAAAAAAGGCACATAGATGAAGGTAGAGTGGATAGTGATAGAAGAGAGATGGAAGCAGGAATGGCTTCTCAATACGAAGGAGTAAACTTGGCTGATGAATATGGATCTCAAAAGGGTAATTTTGAGACAGGAAGAGTTAATGGTGTTGGAAACTACAAACGTAATGGGACAAGGGACATACCACAGGTGCAAATAAGGAACATGCTGATGGAAAAGGCTAGGAAGGAGATATGTATAAAGCTTAATGAATGGCATGTTGCTTCTGTATCAAGGAATTCAGACAAAAGAAATACTAGTAAGGAAGTCAGAGAGAAGGACAGAGAAAGGACTAGAAATGGCATAAAATCTGGTGCAGAAGAATTTGAAAAGCTTGTTGATTCTGAGACCATGGACAAGAAGCCATCCTCTGCTGATTCTGATATTTTTGCTTCTCTGTCTATGAGTGTTCCAGACCCTGACTTCCACGATTTCGACAGTGATCGCACTGAAAGATCTTTTGGTGAGAACCAGGTATGGGCTGCCTATGATGATGATGATGGCATGCCTCGCTACTATGCTTTGATTCGTGATGTAATCTCTGTAAAACCATTGAAAATGAGGATTGGTTGGCTTAACTCTAAAAGCAATGATGAACTGGCCCCAATAAAGTGGGTCAGTTCTGGCTTCCCAAAGACTAGTGGAGATTTCCGAACAGGGAAGTATGAATTTAATGGGTCTCTTAATTCTTTTTCTCATAAGGTTAGGTGGAAGAAAGGTGCAAGAGGTGCTGTACATATATATCCTAATAAGGGAGAAGTTTGGGCTCTATATAGAAACTGGTCCCTTGATTGGAACGAACTCACTCCAGATGAAATCATACATAAATATGACATGGTCGAAGTGCTTGAAGACTACAATGAGGAACGAGGTGTTAAAGTTGCTCCACTTGTTAAAGTTGCTAGTTTCAGGACAGTATTCTGCCGGGATGCAGATCCACGAAATATCAGGAATATTCCAAGGGCTGAGATGTTTCGTTTCTCCCACCAGATACCTTCATACTTGCTTACTGGTCAAGAAGGTCAGAATGCTCCTAGAGGTTGCTTGGAGCTTGATCCTGCTTCTACACCTATGGAACTTCAGGTGGTAACAGAAGCACCAAAGCAGGAAACAGAAATGACAGTTAGAAAGTCTTTAGAAGATAGGTTGGGGCATAGGGAGAATTCCGGGGAAAAAGAGCCGGTCGAGATGTTCCAAACAACTAACGAAGAAGATTCTGTAGGAGATATTTCAAGAAAGGTGATAGCTGAAACAATGAGAAAGAGAGAAAGTAGGCTAGAAAATTTGATTGTATATAAGCGGAAACGTGTGAGGGAGAAGGGAGCGCCGTGA 2442 0.4169 MECNKEDAIKAKELAEKKILEMDLAGAKRFALKAQDLYPDLNGLPQLLTTLEVYVSAEKRINGEVDWYRVLGVEPLADDETIRRRYRKLALTLHPDKNKSVGAEGAFKLISQAWSLLSDKSKRMFYDQNCNFRGIYEEIPDGRPSVPAGQNGFFNFFNTANWKDRDPRSAVHPNPAPTPPVTLKLTFWTMCNSCRTHFEYHTVYINCNLLCPHCRKLFLAFEAPPPPIYRNASSTLRMSQMQREKSILNRMERNCYVSGRTPTSAINSSEKIYESGPFSMPGGISSVPASTSFAGESFNNVRMSFEHLKRGFEATTPPAMMEEAHFGKTHPVKTTGAGSDFQSSYFGSNSVLKGHRPRKKRHIDEGRVDSDRREMEAGMASQYEGVNLADEYGSQKGNFETGRVNGVGNYKRNGTRDIPQVQIRNMLMEKARKEICIKLNEWHVASVSRNSDKRNTSKEVREKDRERTRNGIKSGAEEFEKLVDSETMDKKPSSADSDIFASLSMSVPDPDFHDFDSDRTERSFGENQVWAAYDDDDGMPRYYALIRDVISVKPLKMRIGWLNSKSNDELAPIKWVSSGFPKTSGDFRTGKYEFNGSLNSFSHKVRWKKGARGAVHIYPNKGEVWALYRNWSLDWNELTPDEIIHKYDMVEVLEDYNEERGVKVAPLVKVASFRTVFCRDADPRNIRNIPRAEMFRFSHQIPSYLLTGQEGQNAPRGCLELDPASTPMELQVVTEAPKQETEMTVRKSLEDRLGHRENSGEKEPVEMFQTTNEEDSVGDISRKVIAETMRKRESRLENLIVYKRKRVREKGAP 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1430 813 MobiDBLite consensus disorder prediction 751 776 - -
Glsi13g1430 813 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Glsi13g1430 813 PRINTS DnaJ domain signature 86 101 IPR001623 -
Glsi13g1430 813 PRINTS DnaJ domain signature 68 86 IPR001623 -
Glsi13g1430 813 PRINTS DnaJ domain signature 102 122 IPR001623 -
Glsi13g1430 813 SMART dnaj_3 65 122 IPR001623 -
Glsi13g1430 813 MobiDBLite consensus disorder prediction 452 474 - -
Glsi13g1430 813 PANTHER BNAC03G44070D PROTEIN 1 727 - -
Glsi13g1430 813 MobiDBLite consensus disorder prediction 448 474 - -
Glsi13g1430 813 Pfam Domain of unknown function (DUF3444) 503 710 IPR024593 -
Glsi13g1430 813 Pfam DnaJ domain 66 127 IPR001623 -
Glsi13g1430 813 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Glsi13g1430 813 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Glsi13g1430 813 Gene3D DnaJ domain 64 168 IPR036869 -
Glsi13g1430 813 CDD DnaJ 66 119 IPR001623 -
Glsi13g1430 813 MobiDBLite consensus disorder prediction 751 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1430 Glsi-ChrGlsi13 31221463 31223904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1430 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.901 6.75e-26 108