Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1421 ATGGCGTCTCTCCAGCAGACCTCAGCCTCACTGCAATCCAATCATATTCATTCCACGCGAATCCCGAGAAACTTGTTTACTCATAAACCTCTCCTCAACTTTTCATTCTCCGGCACCACCTTCCCTTCCCTCAAACTGAGATTCGCCGCCGCCACCACCACCAGCCGCCGATCCAACGGTGCTCTCGGAGCTAAAATGTCTGCGACCGCTGCTGCCAGCTACGCTCTTGCACTCGCCGATGTCGCCAAAGGCAACAACACCCTCGACGCCACCTCCGCCGACGTCGACAAAATCGAGGAAATCTTCTCCGACCCTCAAGTATTCGTTTTTTTCGCCAACCCAACTATTGAAATCGAGAAGAAGCGCAAGGTAGTGGAGGAAATTGCGACTTCCTCGAACTTTCAGCCCCATACCCGCAATTTCCTCGACATTCTAGTGGATGCCAAGAGGATTGATCTAATCAAGGAGATAGCCAAGGAATTTGAGTTCGTCTATAACAAATTAACTGACACAGAGCTGGCGGTAGTGAGTTCGGTGGTGAAGTTGGAGTCGCAGCACTTGGCGCAGATAGCCAAGCAGGTGCAGAAGCTGACGGGGGCCAAGAATGTCAGGATCAAGACCGTCATCGATCCAAGTTTGGTGGCCGGCTTCACCGTGAGGTATGGGAATTCAGGATCCAAGTTGATTGACATGAGCGTGAAGAAGCAACTCGAGGATATTGCAGCTCGGCTTGATTTGGGTGACATCACGCTCACTGTATAA 762 0.5144 MASLQQTSASLQSNHIHSTRIPRNLFTHKPLLNFSFSGTTFPSLKLRFAAATTTSRRSNGALGAKMSATAAASYALALADVAKGNNTLDATSADVDKIEEIFSDPQVFVFFANPTIEIEKKRKVVEEIATSSNFQPHTRNFLDILVDAKRIDLIKEIAKEFEFVYNKLTDTELAVVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEDIAARLDLGDITLTV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1421 253 Coils Coil 251 253 - -
Glsi13g1421 253 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 203 222 IPR020781 GO:0015986|GO:0016020|GO:0046933
Glsi13g1421 253 Hamap ATP synthase subunit delta [atpD]. 66 246 IPR000711 GO:0015986|GO:0046933
Glsi13g1421 253 NCBIfam ATP synthase F1 subunit delta 71 244 IPR000711 GO:0015986|GO:0046933
Glsi13g1421 253 Gene3D - 70 162 IPR026015 -
Glsi13g1421 253 PRINTS ATP synthase delta subunit signature 219 237 IPR000711 GO:0015986|GO:0046933
Glsi13g1421 253 PRINTS ATP synthase delta subunit signature 70 89 IPR000711 GO:0015986|GO:0046933
Glsi13g1421 253 PRINTS ATP synthase delta subunit signature 150 164 IPR000711 GO:0015986|GO:0046933
Glsi13g1421 253 PRINTS ATP synthase delta subunit signature 139 150 IPR000711 GO:0015986|GO:0046933
Glsi13g1421 253 PRINTS ATP synthase delta subunit signature 201 216 IPR000711 GO:0015986|GO:0046933
Glsi13g1421 253 Pfam ATP synthase delta (OSCP) subunit 71 244 IPR000711 GO:0015986|GO:0046933
Glsi13g1421 253 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 67 169 IPR026015 -
Glsi13g1421 253 PANTHER ATP SYNTHASE DELTA CHAIN 49 245 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1421 Glsi-ChrGlsi13 31182145 31182906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1421 1 251 Primary Pumps ATPases AT4G09650 62.598 1.54e-102 296