Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1415 ATGGCGACGACGACAACTAGTGTCGGTGGTGGTGGTGGTGGTGGCGGCGGCGAGGACCGGGTCCTTGCGACTGCTCAGCAGATCGTCAAGAGCCTCAACACTCCAAAGGAGGTTCGCGAAGACATGCTCTTGATCTTTTCTAGCTTCGACAATCGCCTTTCAAGTATCACCGATCTCATCAACGGCGAAGATTCCAAGTCTTCCGAAGCTGAGGACCTTGACCGCTTTCAAGCAGCTGAGAAGGTCATCCTCCGCTGGGACGCTTCCCAGAAATCCTCCTCGCTTCTCGATTCTCCGGATGACGCCATTGAGTACTTATCTGCCGTCGACGATATCACACAATGGATTGAACAAATTTCAATCGCACCATCCGGTAAAAGTACCCAAATCATGATGGACCGGGCGGACAAAGCTATCCAGATTGCCATGTCGAGGCTAGAGGACGAGTTGCGACATGCCTTGATTCGAAACACGGTCCCACTTGACGCTGAAAGTCTATATGGATCGATCAGGAGGGTTAGTCTCTCATTCGCATCGACTGATGGGGAGATTAGTGAAAATTTTGAGAGCTTCGGTGAGATCAATGATCGTGGCTCTCAGCGGTTTCATGAGCGAGGTGCGAGCTTGGGCGACGATATCTTCGTTGATTTGGTACGCCCCGACGCAGTGGTAGAGCTGAAAGAGATTGCTGATCGGATGGTTAGGTCCGGGTACGAACAGGAGTGCCTTCAGGTTTATAGCAGTGTCCGTCGAGACGCCTTGGATGAGTGTTTGGCTATCCTAGGTGTTGAGAAACTGAGTATTGAAGAGGTTCAGAAGGTTCCGTGGAAATTACTGGATGAGAAAATGAAGAAATGGATACAAGCTGTCAAAATTGCCGTCAGGGTGCTTCTGACTGGCGAGAAGAGGCTATGTGATACTATATATGATGAATTAGATGAAATCAAGGAGCTATGTTTCAATGAGACTGCAAAAGGGTGTGTTATGCAGTTGTTGAATTTTGGTGAGGCCATTTCAATTTGTAAAAGATCGCCAGAGAAGTTGTTTAGGATATTGGATATGTACGAGTCTTTGAGGGATGTGTTTCATGATCTGCAGGCTGTAGTTTCAGATGAGGTTGTGATCAGTGAGGCCAAAGAAGTGCTAACTAGACTTGGTGAGGCAGCTAAAGGGACATTTGCTGAGTTCGAGAATGCTGTTCGGAATGAGACTTCCAAGAAGCCAGTCGTAACTGGGGATATTCATCCATTGCCCCGTTACGTGATGAACTACTTGAAGTTGCTAGTGGATTATGGTGACCCTATGGACTCACTTCTCGAAGTTAGTGAGGAGGATCTTGATCGTTTTCAAAACAAGTATGGTGGTAATAGTTCTCAGTTAGAGACCATGTCCCCCTTAGGACGTCGAATGCTGTTATTAATGTCAGAGCTTGAGTATAATCTTGAGGAAAAATCAAGACTTTATGAAGACAGTGCGATGCAGTATATATTTTTGATGAACAATATATATTATGTCGTCCAAAAAGTGAAAGACTCGGATCTTCGGATGGTCTTGGGAGATGACTGGGTCCGTAAGCGCCGTGGTCAGATACGCCAGTATGCTACAGGATATCTCAGAGCCTCTTGGACCAAGGCCTTGTCCTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAGTAATGCCTCCAAGACGGCTTTGAAGGAAAGATTCAAGAGTTTCAATTCATGCTTTGAGGATATATACAGGATTCAGACAGCTTGGAAGGTCCCAGATGCTCAGCTTAGGGAAGAACTACGAATATCTATATCAGAGAAAGTGATTCCTGCATACCGCTCGTTTGTGGGAAGGTTTAGTGGTCAACTAGAGGGAAGGCATGCTGGGAAGTACATAAAGTATACACCAGAGGATTTAGAGAACTATTTATTGGATTTATTTGAAGGATTGCCTGGTGTATTGCACCATTTAAGGAGAAAAAGTACATAA 1983 0.4599 MATTTTSVGGGGGGGGGEDRVLATAQQIVKSLNTPKEVREDMLLIFSSFDNRLSSITDLINGEDSKSSEAEDLDRFQAAEKVILRWDASQKSSSLLDSPDDAIEYLSAVDDITQWIEQISIAPSGKSTQIMMDRADKAIQIAMSRLEDELRHALIRNTVPLDAESLYGSIRRVSLSFASTDGEISENFESFGEINDRGSQRFHERGASLGDDIFVDLVRPDAVVELKEIADRMVRSGYEQECLQVYSSVRRDALDECLAILGVEKLSIEEVQKVPWKLLDEKMKKWIQAVKIAVRVLLTGEKRLCDTIYDELDEIKELCFNETAKGCVMQLLNFGEAISICKRSPEKLFRILDMYESLRDVFHDLQAVVSDEVVISEAKEVLTRLGEAAKGTFAEFENAVRNETSKKPVVTGDIHPLPRYVMNYLKLLVDYGDPMDSLLEVSEEDLDRFQNKYGGNSSQLETMSPLGRRMLLLMSELEYNLEEKSRLYEDSAMQYIFLMNNIYYVVQKVKDSDLRMVLGDDWVRKRRGQIRQYATGYLRASWTKALSCLKDEGIGGSSSNASKTALKERFKSFNSCFEDIYRIQTAWKVPDAQLREELRISISEKVIPAYRSFVGRFSGQLEGRHAGKYIKYTPEDLENYLLDLFEGLPGVLHHLRRKST 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1415 660 FunFam Exocyst subunit Exo70 family protein 88 653 - -
Glsi13g1415 660 Pfam Exo70 exocyst complex subunit 284 642 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi13g1415 660 PANTHER EXOCYST COMPLEX PROTEIN EXO70 67 647 IPR004140 GO:0000145|GO:0006887
Glsi13g1415 660 SUPERFAMILY Cullin repeat-like 74 646 IPR016159 -
Glsi13g1415 660 Gene3D Exocyst complex component Exo70 82 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1415 Glsi-ChrGlsi13 31154074 31156056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1415 19 659 EXO70 exocyst subunit family AT5G50380 62.018 0.0 808