Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1411 ATGGCAGTCACATTATATGACCTTAACTCTGCATCTGGGTTGAAGAAGCTCGATGATCACCTTCTCTCCCGCAGTTATGTCACTGGGTACCAAGCTTCAAAAGACGATGTTGCAGTATACGCAGCTTTGTCAAAGGCTCCATCGGCTGAATATGTTAATATGTCTCGGTGGTACCGGCACATTGATGCTTTATTGAGGATATCGGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTCAAGGGATCTCTTCCCATAACAGAAGAGACTGTTGCCACTCCTCCAGCTGCTGATAAAAAGGCCACTTCAGCTGATGATGAGGACGACGACGTGGATTTGTTTGGCGAAGAGACAGAGGAGGAGAAGAAGGCTGCTGAAGAACGTGCAGCTGCCGTGAAGGCATCTGCAAAAAAGAAAGAGTCCGGGAAATCATCCGTTCTGATGGACGTAAAGCCATGGGATGATGAGACCGACATGAAAAAGCTTGAAGAGGCTGTGAGAAATGTTCAGATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGCCCCTGTTGGGTACGGTATCAAGAAACTACAAATTATGCTTACCATTGTGGATGACTTGGTCTCTGTTGACAATCTTATTGAGGATCATCTCATGAATGAACCAATCAATGAATATGTCCAGAGCTGCGACATTGTGGCCTTCAATAAAATATGCATATCATCACGACCCGTGGTTGTGCATATCGCGCTAATGCTATCTCAACCTTTGTTGCAGAATCTAGCATTGGACTTGGATGATCGTGGCAGTGTGGTGAACGTTACAAGAATTTTGGATAAGAGGGACATCCAATATGTACCAAATAACTTCAAAGAAAAATTATTGTACCTTAAAGGTCTGAAAAAACGCTACAGGGTACACGTTCTTCATGGAAAACGGCGAACCAGTCACCCGATTATTTTCGGTTCACCCGACCAACGAGACGATAAAAGTATGAACGAGACACCAAAAAGAAAATGGGGGAGAGAATCGAAACTGGCAAAAAGATAA 1029 0.4461 MAVTLYDLNSASGLKKLDDHLLSRSYVTGYQASKDDVAVYAALSKAPSAEYVNMSRWYRHIDALLRISGVSGEGSGVTVKGSLPITEETVATPPAADKKATSADDEDDDVDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDVKPWDDETDMKKLEEAVRNVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDNLIEDHLMNEPINEYVQSCDIVAFNKICISSRPVVVHIALMLSQPLLQNLALDLDDRGSVVNVTRILDKRDIQYVPNNFKEKLLYLKGLKKRYRVHVLHGKRRTSHPIIFGSPDQRDDKSMNETPKRKWGRESKLAKR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1411 342 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Glsi13g1411 342 FunFam Elongation factor 1-delta 1 3 78 - -
Glsi13g1411 342 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Glsi13g1411 342 Gene3D - 4 80 - -
Glsi13g1411 342 SUPERFAMILY GST C-terminal domain-like 9 67 IPR036282 -
Glsi13g1411 342 MobiDBLite consensus disorder prediction 84 109 - -
Glsi13g1411 342 MobiDBLite consensus disorder prediction 316 342 - -
Glsi13g1411 342 MobiDBLite consensus disorder prediction 310 342 - -
Glsi13g1411 342 FunFam Elongation factor 1-beta 1 like 136 231 - -
Glsi13g1411 342 Gene3D - 135 231 IPR014717 -
Glsi13g1411 342 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Glsi13g1411 342 CDD EF1B 140 231 IPR014038 GO:0003746|GO:0006414
Glsi13g1411 342 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Glsi13g1411 342 Coils Coil 114 134 - -
Glsi13g1411 342 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Glsi13g1411 342 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1411 Glsi-ChrGlsi13 31141862 31144505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1411 7 231 Eukaryotic Initiation Factors Gene Family AT2G18110 80.088 8.94e-116 333