Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1388 ATGTATCCTCCTCTTTATAAGGCCTTCAAGGGTGAGACTCGTGATGAATTTCCCCTACGTGTCCCTCTTTCGGCAATGCGTTGCTATGCTATTCCTGGCATGCCTATTTCGGAGAGCAGCGCTTCTACTTGGATCCTTCCCTTTTCTGATGAAACCAAAAGAGAAAACAAGAAGATCAAGAGAACCATGAGCATCTCTGACGTTCTTGAAAACTCTAGTAGTCATTCAAGCGGTGGGAGTAGTGATTGCTATAGCGGTCTCAGCCGTAGCAGCAGCGTGAATAGCCTGCCAAGGCTCCATTTCAGAGATCACATATGGACTTATACCCAGAGATACCTTGCTGCTGAAGCTGTTGAAGAGGCAGCAAAGGATATGATCAATTCTGAAGGAAGTGGAACTGAAGAAGATGGATGTGCTGATGGAATGAGACTTGTTCAACTTCTAATTGCTTGCGCAGAGGCCGTGGCTTGTCGTGACAAATCACATGCTTCCACCTTACTATCTGAACTTAGAGCTCATGCTTTGGTTTTTGGCTCCTCTTTCCAAAGAGTTGCTTCTTGTTTTGTCCAAGGCCTCGCCGATAGGCTTGCTATGATTCAACCCATTGGGGCTGTGGGATTTATCGCACCCACGATGAACATTATGGACGCAGCCTCAGAAAAAATGGAAGAAGCATTTCGATTGGTGTATGAGATTTGTCCACATATTCAGTTTGGTCACTTTGTAGCTAACTCCACAATATTGGAAGCCTTTGAAAATCACGGTTTTGTACATGTGGTGGACCTGGGGATGAGCCTTGGTCTTTCCCATGGACAACAATGGCGGGGACTGGTCCAGAGCCTCGCTAACCGTGCTGGCCAACCCGTTCGTCGCCTTCGAATTACTGGGGTTGGCCTTTGTATTGAAAAACTCCAGATCATAGGTGAAGGACTCGAAGTTTATGCAAATGAATTGGGAATTAATGTGGAATTCTCAGCGGTGCAAAAGAACTTGGAAAATTTGGATCCTGATGACATAAAAGTCTATGAGGGAGAGGTTCTTGTCGTCAATAGCATTCTTCAGTTGCATTGTGTGGTTAAAGAAAGTCGCGGAGCTTTGAACTCAGTCCTGCAGATGATCCATAAACTTTCACCAAAACTCTTGGTTTTGGTTGAGCAGGACTCAAGCCACAATGGACCCTTTTTTCTTGGGAGATTCATGGAAGCACTGCACTACTACTCTGCTATTTTTGATTCCCTTGATGCTATGTTGCCTAAATATGACACTAAGCGAGCCAAAATAGAGCAATTCTACTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAGGGACCAGCAAGGGTGGAGAGGCATGAGAGAGTGGACCAGTGGCGCAGGAGGATGAGCAGAGCTGGATTTCAGGCTGCACCTATGAAGATGGTGGCTCAGGCCAAGCAGTGGCTTCACAAGAATAACGTTTGTGACGGCTATAACGTTGTGGAAGAGAAGGGGTGCTTGGTGCTTGGCTGGAAATCAAAGCCAATTGTTGCAGCTTCTTGCTGGAAATGCTAA 1551 0.4597 MYPPLYKAFKGETRDEFPLRVPLSAMRCYAIPGMPISESSASTWILPFSDETKRENKKIKRTMSISDVLENSSSHSSGGSSDCYSGLSRSSSVNSLPRLHFRDHIWTYTQRYLAAEAVEEAAKDMINSEGSGTEEDGCADGMRLVQLLIACAEAVACRDKSHASTLLSELRAHALVFGSSFQRVASCFVQGLADRLAMIQPIGAVGFIAPTMNIMDAASEKMEEAFRLVYEICPHIQFGHFVANSTILEAFENHGFVHVVDLGMSLGLSHGQQWRGLVQSLANRAGQPVRRLRITGVGLCIEKLQIIGEGLEVYANELGINVEFSAVQKNLENLDPDDIKVYEGEVLVVNSILQLHCVVKESRGALNSVLQMIHKLSPKLLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKMVAQAKQWLHKNNVCDGYNVVEEKGCLVLGWKSKPIVAASCWKC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1388 516 Pfam GRAS domain family 144 515 IPR005202 -
Glsi13g1388 516 ProSiteProfiles GRAS family profile. 135 515 IPR005202 -
Glsi13g1388 516 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 107 510 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1388 Glsi-ChrGlsi13 31002189 31003739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1388 126 516 GRAS Transcription Factor Family AT1G66350 37.343 3.79e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi13g1388 GRAS 5.4e-112 CL0063