Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1380 ATGAAGAAGGTCACAACAATTGCTTCAATTTTCTTCATAATAATGATTATTTCCAGTGAAATCGACCATGTTTCTTCGTCGTCGCCTCTCTTACATGGAAACCAGGTTTATGAGGACTCTGCTGCTGGAAGACATCTTAAACAGGAACAAGAACATGTTCATGAAGTACATTGCTCTAGAGAAAGAAGTAGAGCAGCTTCAAAAATAATTGAGGAGTATTTGATGCCATTTGTGGAACGAGAAAACTTTCAGCTCTCAAGCAAGTGCAGACTTCATCCTGACAATAATATGTTTGGGGATCAGGAAGAGCATAAAATTCACATAGATATAAATGAATGGAGGTGTGGATATTGTAAGAAAAGCTTCCGTGCTGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAATCTTCTAAATGTAAGTCATGGTAAGTGCTTGGCTGATTTATGTGGGGCACTGCATTGTGATGCTGTGATGAACGCCAAATCCCCTAAAACCAAGTGTAAGCCAGCCGCTGCTGCTAGAAATCGCCACCTATGTGAGAGTCTTGCTGATAGTTGTTTTCCTATAAATGAGGGTCCCTCAGCCAGCCGTCTTCGTGAATTGTTTCTGCACCAATTTTGTGATGCCCACACCTGTTCAGGGAAACAGAAACCCTTTGTTAGAGGAGGCAGGCAACGAAGTTTGTTCTATTTGGCTTCTGGAGCATTGACCTTGGTGCTACTTCCTGTGTTTTATCTTTTTGTTTATTTAGTGCAAAGAGATATGAAGAGCCGGACTCAAGAACTTCAGCGCATCTCAAAAGTGGGACGAAAAATGAAACCATCATGA 837 0.4074 MKKVTTIASIFFIIMIISSEIDHVSSSSPLLHGNQVYEDSAAGRHLKQEQEHVHEVHCSRERSRAASKIIEEYLMPFVERENFQLSSKCRLHPDNNMFGDQEEHKIHIDINEWRCGYCKKSFRAEKFLDQHFDNRHYNLLNVSHGKCLADLCGALHCDAVMNAKSPKTKCKPAAAARNRHLCESLADSCFPINEGPSASRLRELFLHQFCDAHTCSGKQKPFVRGGRQRSLFYLASGALTLVLLPVFYLFVYLVQRDMKSRTQELQRISKVGRKMKPS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1380 278 PANTHER ZINC FINGER PROTEIN-RELATED 4 277 - -
Glsi13g1380 278 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1380 Glsi-ChrGlsi13 30960469 30963615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1380 34 278 C2H2 Transcription Factor Family AT5G63280 62.097 1.74e-109 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi13g1380 None None None