Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1368 ATGGACGTCAAAACCAGCCCCCCGCCCGATTTCTACAGTATTTCTCCTATCTCCTCCGCCGACTATCAGAGCGAACGGGTCTTACCCGAGCCCGATGTTTATATACACACTTCCGGTGGGGCACGCATTCCCGCACACACAAGCATTCTGGCTGCGGTGTCGCCGGTTCTAGAGAATATCATAGATCGACCCCGCAAGCATCGGAGCTCCGAGAGAATAATCCAAATCCACGGCGTTCCTTGCGACGCCGTCACCGCTTTTGTCGGCTTCCTCTACTGCTCCAGGTGCACGGAGGAGCAGATGGAAAAGTACGGGATGCATCTGCTGGCATTGTCGCACGTGTATTTGGTGCCACAGCTGAAGCAGAGGTGTATCAAGGGACTAGTTGAACGGTTAACGATTGAGAATGTGGTGGATGTGCTGCAACTCGCAAGGCTCTGCGACGCACCCGATCTTTACCTCAAGTGCATGAAATTGCTGACCAATAACTTCAAAGCTGTGGAGGCCACAGAAGGCTGGAAATTCTTGCAGAGGTATGACCCCTGGCTGGAGCTCGACATTCTCCGCTTCATGGATGAGGACGAATCGAGGAAAAAGAAATCAAGGAAGCAGAGGGAGGAGCAGAGGTTGTACATAGAGCTGAGCGAGGCAATGGAGTGTCTGGAGCACATATGCACTGAAGGGTGCACGGACGTTGGGCCTTACGATGTAGAGCTTAAAGAGAGGAGACCGTGCAGCAAATTCTCCACTTGTCAAGGTCTTCAGCTCTTAATCAGGCACTTCGCCGCGTGTAATAAGAGAATGAACGGAGGGTGCTTACGCTGCAAGCGAATGTGGCAGCTCTTCAGACTTCATTCCTCCATTTGCCAACAAACCGATTCGTGCAAGGTTCCTCTTTGCAGGGAAATTCAAATGAAAACGCAGCAAGAGAAAAGGAAAGATGATCCAAGGTGGAAATTACTAGCCAGGAAGGTGGCCTCAGCCAAAGCCATGTCTACACTGTCCCTGCCAAAGAGGAAGCGAGATGAGGAAATTAGAGTGACAATGAACAGTTATGGGATCAGAAATTTCAAATTACAATGA 1083 0.506 MDVKTSPPPDFYSISPISSADYQSERVLPEPDVYIHTSGGARIPAHTSILAAVSPVLENIIDRPRKHRSSERIIQIHGVPCDAVTAFVGFLYCSRCTEEQMEKYGMHLLALSHVYLVPQLKQRCIKGLVERLTIENVVDVLQLARLCDAPDLYLKCMKLLTNNFKAVEATEGWKFLQRYDPWLELDILRFMDEDESRKKKSRKQREEQRLYIELSEAMECLEHICTEGCTDVGPYDVELKERRPCSKFSTCQGLQLLIRHFAACNKRMNGGCLRCKRMWQLFRLHSSICQQTDSCKVPLCREIQMKTQQEKRKDDPRWKLLARKVASAKAMSTLSLPKRKRDEEIRVTMNSYGIRNFKLQ 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1368 360 Gene3D Potassium Channel Kv1.1; Chain A 26 132 IPR011333 -
Glsi13g1368 360 Gene3D - 133 206 - -
Glsi13g1368 360 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 28 342 IPR044513 -
Glsi13g1368 360 Pfam TAZ zinc finger 215 300 IPR000197 -
Glsi13g1368 360 Gene3D TAZ domain 207 311 IPR035898 -
Glsi13g1368 360 SUPERFAMILY TAZ domain 206 305 IPR035898 -
Glsi13g1368 360 SUPERFAMILY POZ domain 32 162 IPR011333 -
Glsi13g1368 360 ProSiteProfiles BTB domain profile. 31 100 IPR000210 GO:0005515
Glsi13g1368 360 SMART TAZ_2 208 301 IPR000197 -
Glsi13g1368 360 CDD BACK 133 176 - -
Glsi13g1368 360 Pfam BTB/POZ domain 31 130 IPR000210 GO:0005515
Glsi13g1368 360 SMART BTB_4 31 132 IPR000210 GO:0005515
Glsi13g1368 360 FunFam BTB/POZ and TAZ domain-containing protein 2 133 203 - -
Glsi13g1368 360 FunFam BTB/POZ and TAZ domain-containing protein 2 204 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1368 Glsi-ChrGlsi13 30892376 30895352 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Glsi13g1368 BTB 2.5e-12 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1368 13 30892376 30895352 Glsi13g1368 13 30892376 30895352 ECH