Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1363 ATGGCTCTCTCTGCTCCCAAATCCCGCCTCTTACTCTTCTCATTCTTCTCCCTTCTTTTCTTCATCCATGCCAAATTAGATCTCGACCCTTCAGACCTCAAAGCTCTCTCTATTCTCCAGAAGGGACTGGGGGTCAACGGTCAACGCCACCAGTCCACCCACCCATGTAACACCGACGGTGTCTTCTGTGAGAGGCGGCTCTCCAACAACGAGAGCTACGTTCTCAGAATCACCAGGCTCATCTTAAAGTCCAAGAACCTTAACGGGGTTCTCTCCCCTGCAATTGGGCGCCTCACCGAGCTCAAAGAGCTCTCTCTTTCGGACAACCAACTTGTTGACCAAATCCCAACTCAGATAGTTGATTGCCGGAAGCTGGAAATTCTTGACCTTGGAAACAACCGCTTCTCCGGCGAAGTCCCGTCTGAATTATCCTCCCTCATTCGCCTTCGAATCCTTGACGTCTCTTCCAACAAATTCTCTGGGAATTTGAATTTCTTGAAGTATTTCCCCAACCTGGAAAGTCTCTCCGTGGCGGATAATCTCTTCACAGGGAGAGTTCCAGTGTCCGTACGTTCATTTCGCAATCTCCAACACTTCAACTTTTCAGGGAATCGTTTCCTTGAAGTTCCTGCGCCAATGATGAACAAGTTTGGACGCTCCGCATCAGATGTCCCCAAACGGTACATCCTCGAGGAAAATTCAAATTCAACTGGAAGAAGCAATAACAAAACTTCTGCACCTGCTCCAAAATCCAGGAAGAGTAATTCAACTGCTGAAGCTCCAGCTCCAGCTCGAGCGTCGTCACATCACAAACACAAGTCGAACAAGAGGAAACTAGGTGGGTGGATTCTCGGATTCATAGCTGGATCACTGGCTGGGACCGTATCTGGATTCCTATTTTCTTTGCTGTTCAAGTTGGCCTTAGCTGTGCTTAAAGGAGGAGGGAAGAGCTCAGGCCCTGCAATTTACAGCCCTTTGATTAAAAAGGCAGAGGACTTGGCTTTCTTGGAGAAAGATGATGGTCTGAATTCATTAGAAGTCATTGGAAGAGGTGGATGTGGAGAAGTTTACAAGGCTGAATTACCAGGAAGTAATGGAAAAATTGTTGCTATAAAGAAGATTATTCAACCTCCAAAGGACGCAGCAGAACTGGCTGAAGAAGACAGCAAGCTCTTGCACAAAAAAATGCGTCAAATTCGATCAGAGATTAATACAGTTGGTCAAATTCGACACCGCAACCTTCTACCTCTGCTAGCTCATGTGTCAAGGCCTGATTGCCACTACCTTGTGTATGAATACATGAAGAATGGAAGTTTACAAGATATGCTGAATCAGGTTCAGGAAGGTAAAAGAGAGTTGGATTGGTTGGCACGGCACAAGATTGCAGTTGGAGTAGCATGTGGCCTTGAATACCTTCACATGAGCCACAGCCCTCGTATAATTCATAGAGATCTCAAGCCAGCAAATGTTCTTCTAGATGATGATATGGAGGCTCGCATTGCAGATTTTGGGCTTGCAAAGGCGATTCCGGATGCTCAAACACACGTCACAACTTCAAATGTTGCGGGCACTGTGGGTTATATAGCACCAGAATATCACCAGATATTGAAGTTCACTGACAAGTGTGACATCTACAGCTTTGGGGTTCTACTTGCTGTCTTGGTGATAGGAAAGTTTCCATCTGATGATTTTTTCCAGCACACAGACGAGATGAGTTTGGTCAAGTGGATGAGAAACGTGATGACTTCGGAAAATCCTGCGCAGGCAATTGATCCAAAGCTTATGGGCAACGGACATGAGGAGCAGATGTTTCTGGCTCTGAAGATTGCCATCTTTTGCACCCTAGATGATCCAAAGGAGAGGCCTAACAGTAAGGATATTACCCGTATGTTGGCTCAAATCAAACACTAA 1911 0.4605 MALSAPKSRLLLFSFFSLLFFIHAKLDLDPSDLKALSILQKGLGVNGQRHQSTHPCNTDGVFCERRLSNNESYVLRITRLILKSKNLNGVLSPAIGRLTELKELSLSDNQLVDQIPTQIVDCRKLEILDLGNNRFSGEVPSELSSLIRLRILDVSSNKFSGNLNFLKYFPNLESLSVADNLFTGRVPVSVRSFRNLQHFNFSGNRFLEVPAPMMNKFGRSASDVPKRYILEENSNSTGRSNNKTSAPAPKSRKSNSTAEAPAPARASSHHKHKSNKRKLGGWILGFIAGSLAGTVSGFLFSLLFKLALAVLKGGGKSSGPAIYSPLIKKAEDLAFLEKDDGLNSLEVIGRGGCGEVYKAELPGSNGKIVAIKKIIQPPKDAAELAEEDSKLLHKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDMLNQVQEGKRELDWLARHKIAVGVACGLEYLHMSHSPRIIHRDLKPANVLLDDDMEARIADFGLAKAIPDAQTHVTTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVLLAVLVIGKFPSDDFFQHTDEMSLVKWMRNVMTSENPAQAIDPKLMGNGHEEQMFLALKIAIFCTLDDPKERPNSKDITRMLAQIKH 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1363 636 Pfam Protein kinase domain 344 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1363 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 74 635 - -
Glsi13g1363 636 SUPERFAMILY Protein kinase-like (PK-like) 337 632 IPR011009 -
Glsi13g1363 636 FunFam Leucine-rich repeat receptor protein kinase EMS1 69 166 - -
Glsi13g1363 636 MobiDBLite consensus disorder prediction 232 274 - -
Glsi13g1363 636 Gene3D Transferase(Phosphotransferase) domain 1 434 636 - -
Glsi13g1363 636 ProSiteProfiles Protein kinase domain profile. 342 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1363 636 Gene3D Ribonuclease Inhibitor 33 144 IPR032675 -
Glsi13g1363 636 MobiDBLite consensus disorder prediction 232 262 - -
Glsi13g1363 636 SMART serkin_6 342 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1363 636 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Glsi13g1363 636 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 329 433 - -
Glsi13g1363 636 FunFam Leucine-rich repeat receptor-like protein kinase 434 636 - -
Glsi13g1363 636 SUPERFAMILY L domain-like 51 212 - -
Glsi13g1363 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Glsi13g1363 636 Gene3D Phosphorylase Kinase; domain 1 332 433 - -
Glsi13g1363 636 Gene3D Ribonuclease Inhibitor 145 219 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1363 Glsi-ChrGlsi13 30846709 30848619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1363 8 636 Receptor kinase-like Gene Family AT2G31880 64.984 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Glsi13g1363 Pkinase 1.9e-44 CL0016