Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi13g1353 | ATGGCCATTAATGAGCTTTTGCCGGCAAACCTTGTCCACCAGTTTGACTGGGCATTACCTTGTGGAAAAGCAGGGGAGGCCTTGGACACGTCGGAAACAGTTGGGTTGACCAAGCATAGAAAAAGATACCTCTTTTCTGAGGCTAATGGTAGTGAATTTGCGGTGACAACCAAGAGAGGAAGAATCCGCAATACAAACACAGGCAGAGAGTTGTCTACGGAAACCATAAAAATGACTACTTTTCTGCAAAGTTTAATACTTCACGTAAGCTCCTCCTGGTTTTTGCACGTAGCTTTGCTAATTATCTTACCCATCTTCCTCGTTAATGTGCTTTTCAAATGGTATTCCAGTTCTACAACCTGCAGGCAAAACTTACCCCCTTCTCCTCCAAAACTCCCAATAATAGGAAATCTTCATCAAATTGGCTTGTGCCCTCACCGCACACTCCAATCCTTAGCTCAAAACTATGGCTCCTTGATGTTGCTTCACTTTGGGAAAGTGCCAATCCTTGTGGTCTCGTCTGCTGATGCCGCTCGCGAGGTAATGAAAACCCATGACCTGGTCTTTTCCAACAGGCCACGACGTAAAATGTCAGATATACTCTTATATGGCTCCAAAGACATGGCAACTGCCACATATGGGGAGTACTGGAGGCAGATAAGGAGCATCAGTGTCTTACATCTTCTGAGTAACAAAAGGGTTCAATCTCTTCGTGCTGTGAGAGAGGAAGAAACTGCTATACTGATGGAAAAGATCACGCAGTGTTCCCTTTCTAACTTGTCAGTGAATTTAAGTGAGTCATTCTCAATAATTACGAATGATATAATTTGCAGGGTAGCTTTGGGGAAGAAATACAGTGGAGGAGAAGGTGGGAGGAAGTTTGAGGAGCTTCTGATTGAGTTTGGAGAGTTATTGGGTGCTTTCGTTGTAGGGGACTATATACCTTGGCTTGATTGTTTGGGTCAATTGAATGGCTTGTACGCCAAAGCAGACAGAGTGGCTAAAGAGTTGGATCATTTTTTTGAGGAAGTAATTGAAGAGCACATTAATCATGGGGTGAAACAAGGAAGTGATCGGCTTGTTAATGGAGACAGTGAAGTACTGAATAATGATTTTGTGGACGTTTTGCTTCGGATCCAAAAGACAAACACGGTTGGCTTCCCAGTTGACAGAACAATCATAAAGGCTTTGATCCTGGATATGTTTGCTGCAGGCACCGACACTACCTACACAGTCCTAGAGTGGGCAATGACTGAACTCTTAAGGCATCCAATAGTCTTGAAGAAACTGCAAGATGAAGTGAGGAATGTGGTTGGTTCAAGAGCTCAAGTGACTGAAGAGGATTTGGACCACATGCATTACCTAAAGGCTGTGATTAAAGAAACCCTACGCATTCATTCCCCAATTCCTTTATTAGTGCCTCGGGAGTCCATGCAGGATATCAAACTCATGGGCTATGACATTGCGGCTGGGACGCAGGTGATAGTCAACGCTTGGGCAATTGCAAGAGATCCTGCATGCTGGGACCAACCTCAAGAGTTTAAACCAGAAAGGTTCTTGAATAGTTCAGTGGATTTCAAAGGACAACACTTCGAACTGATCCCATTTGGAGCAGGAAGGAGGGGTTGCCCAGGGTCAACGTTTGCAATGGCTGTGAATGAGGTGGTGCTAGCAAACGTTGTCCACCAATTTGATTGGGCATTACCCGGTGGGCAAACAGGGGAAGACTTGGACATGTCAGAAACTGCTGGGTTGACCTGTCATAGAAAATGTCCTCTGACTGCAATTGCATCCCCATATAAGCGGTGA | 1809 | 0.4478 | MAINELLPANLVHQFDWALPCGKAGEALDTSETVGLTKHRKRYLFSEANGSEFAVTTKRGRIRNTNTGRELSTETIKMTTFLQSLILHVSSSWFLHVALLIILPIFLVNVLFKWYSSSTTCRQNLPPSPPKLPIIGNLHQIGLCPHRTLQSLAQNYGSLMLLHFGKVPILVVSSADAAREVMKTHDLVFSNRPRRKMSDILLYGSKDMATATYGEYWRQIRSISVLHLLSNKRVQSLRAVREEETAILMEKITQCSLSNLSVNLSESFSIITNDIICRVALGKKYSGGEGGRKFEELLIEFGELLGAFVVGDYIPWLDCLGQLNGLYAKADRVAKELDHFFEEVIEEHINHGVKQGSDRLVNGDSEVLNNDFVDVLLRIQKTNTVGFPVDRTIIKALILDMFAAGTDTTYTVLEWAMTELLRHPIVLKKLQDEVRNVVGSRAQVTEEDLDHMHYLKAVIKETLRIHSPIPLLVPRESMQDIKLMGYDIAAGTQVIVNAWAIARDPACWDQPQEFKPERFLNSSVDFKGQHFELIPFGAGRRGCPGSTFAMAVNEVVLANVVHQFDWALPGGQTGEDLDMSETAGLTCHRKCPLTAIASPYKR | 602 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi13g1353 | 602 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 536 | 545 | IPR017972 | GO:0005506|GO:0016705 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 543 | 566 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 533 | 543 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 177 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 153 | 172 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 456 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 271 | 289 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 413 | 439 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 497 | 521 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | E-class P450 group I signature | 393 | 410 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | CDD | CYP71-like | 156 | 593 | - | - | |
| Glsi13g1353 | 602 | Gene3D | Cytochrome P450 | 111 | 596 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | Coils | Coil | 427 | 447 | - | - | |
| Glsi13g1353 | 602 | SUPERFAMILY | Cytochrome P450 | 126 | 598 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | P450 superfamily signature | 534 | 543 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | PRINTS | P450 superfamily signature | 404 | 421 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | Pfam | Cytochrome P450 | 126 | 584 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi13g1353 | 602 | FunFam | Cytochrome P450 83B1 | 113 | 596 | - | - | |
| Glsi13g1353 | 602 | PANTHER | CYTOCHROME P450 71B11-RELATED | 108 | 598 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi13g1353 | Glsi-ChrGlsi13 | 30798700 | 30803741 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi13g1353 | 95 | 600 | Cytochrome P450 | AT3G48280 | 49.704 | 0.0 | 527 |