Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1352 ATGTCTAGTTTTTGGAGAAGTTTCATACTGCAAGAGGACATCTCCTGGTTGTTGTATACAGTGTTGCTCATTATCTTACCCATCTTCCTCGTTCTGCTATTCAAATGGAATTCCAATTCTACAATCAGCAAAAACTACCCCCCTTCTCCTTCCAAATTCCCAATAATAGGAAATCTCCATCAACTTGGCCTGTATCCTCACCGCAAACTCCAATCTTTGGCTCAAAAGTATGGCCCCTTAATGCTTCTTCATTTTGGGAAGGTACCAGTTCTTGTGGTCTCTTCTGCTGATGTCGCCCGTGAGGTAATGAAAACCCATGATCTCATCTTTGCTAACAGGCCCCCAGGTAAAATGTTTGAGATACTCCTATATGGCTCCAAAGATGTATCCGCTGCCCCATATGGAGAGTACTGGAGGAAGATAAGGAGTATTTGCGTCATACATCTTCTGAGTAGCAAAAGGGTTCAATCTCTTCGTGCCGTGAGAGAGGAAGAAACTGCAATACTTATGGAAAAGATCAACGACTCTTCTTCTTCACCAGTGAATCTAAGCCAGTTATTCCCCACAGTTACGAATGATATAATTTGTAGGGTCGCTTTGGGAAGAAAATACGGCGCCGAAAGTGGGAGGAAGTTTAAAGAACTTTTGGGAAAGTTTACCGAGCTATTTAGTGCTTTTGTGTTAGGGGATTATATACCTTGGCTTGACTGGTTGAGTAGTGTCAATGGCATATACGCTAAAGCTGACAGAGTGGCTAAACAGTTCGATCAAATTTTGGATGAAGTAGTTGAAGAGCACATCAATGGTGGGAAAGGAGGCAGTGACGGGCATGTTAGTGTAGATACTGAAGGCCATAATGATTTTGTGGACGTTTTGCTTTGGATCCAAAGAACAAACTCAATTGGCTTTCCAATTGACAGAACTGTCATAAAGGCTTTGATCTTGGATATGTTTGCTGCGGGTACGGACACCACATCCGCAGTTCTAGAATGGGCAATGACAGAACTCTTGAGGCATCCAGTTGCTATGAAAAAACTGCAAGATGAGGTGAGGAACGTGGGTGGTGATAGAGCGCACATAACTGAGGAGGATATGAGTCACATGCCCTACCTAAAGGCTGTGCTTAAAGAAACACTACGCTTACATCCCCCTCTTCCCTTGTTAGTCCCTCGAGAAAGCATGCAAGATATCAAACTGAAAGGCTATGACATCGCAGCTGGTACGAGAGTAATTGTCAATGCTTGGGCAATTGCAAGAGATCCTGCATACTGGGACCAACCTCAAGAGTTTGAACCAGAGAGGCTCTTGAATAGTTCGGTAGATTACAAAGGACATGATTTCCAGTTGATCCCTTTTGGAGGTGGAAGAAGGGGGTGCCCAGGAATTCTCTTTGCCATGGCCATTAATGAGCTTTTGCTGGCAAACCTTCTCCACCAGTATGACTGGGCATTACCTTGTGGAAAAGCAGGGGAGGCCTTGGACACGTCGGAAACAGTTGGGTTGACCACGCATAGAAAGATACCTCTTGTAGTAGTTGCATCCCCGCGTAACAGATAA 1557 0.4438 MSSFWRSFILQEDISWLLYTVLLIILPIFLVLLFKWNSNSTISKNYPPSPSKFPIIGNLHQLGLYPHRKLQSLAQKYGPLMLLHFGKVPVLVVSSADVAREVMKTHDLIFANRPPGKMFEILLYGSKDVSAAPYGEYWRKIRSICVIHLLSSKRVQSLRAVREEETAILMEKINDSSSSPVNLSQLFPTVTNDIICRVALGRKYGAESGRKFKELLGKFTELFSAFVLGDYIPWLDWLSSVNGIYAKADRVAKQFDQILDEVVEEHINGGKGGSDGHVSVDTEGHNDFVDVLLWIQRTNSIGFPIDRTVIKALILDMFAAGTDTTSAVLEWAMTELLRHPVAMKKLQDEVRNVGGDRAHITEEDMSHMPYLKAVLKETLRLHPPLPLLVPRESMQDIKLKGYDIAAGTRVIVNAWAIARDPAYWDQPQEFEPERLLNSSVDYKGHDFQLIPFGGGRRGCPGILFAMAINELLLANLLHQYDWALPCGKAGEALDTSETVGLTTHRKIPLVVVASPRNR 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1352 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Glsi13g1352 518 FunFam Cytochrome P450 83B1 34 512 - -
Glsi13g1352 518 SUPERFAMILY Cytochrome P450 47 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 CDD CYP71-like 76 509 - -
Glsi13g1352 518 PANTHER CYTOCHROME P450 71B11-RELATED 31 514 - -
Glsi13g1352 518 Pfam Cytochrome P450 47 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1352 518 Gene3D Cytochrome P450 40 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1352 Glsi-ChrGlsi13 30787692 30793230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1352 44 514 Cytochrome P450 AT3G48270 52.542 0.0 543