Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1336 ATGGAATCCAAACCCAGAAGCACGAAAAGACCTACTATTAAGTTCCTCTGTAGCTATGGCGGGAAGATTCTTCCTCGCGTCACCGACGGTAAGCTCCGCTATGTCGGCGGCCACACTAGAGTCCTCGCCGTCGAGCCTTCTATTTCTTATTCAGAGCTAATGGTGAAGCTTGGGGAACTCTGTGGTTCGTCTGTCACATTGAGATGTCCATTGCCGAACGGAGACTTGGAGACCTTGATTTCGATAACCAGCGACGAAGATTTGCGCAATATTATTGAGGAATACGATCGAGCTTCGTCGTCGTTAGCTCATCCGCTGAAGGTCAGAGCCATTCTTTCCCCGCCGAAATCACTCAAGAGAGCATCTCCTGCTTCGTCTTCTGCGTCTAGCGCCAATCAATCTCCGTCCAGATCTCCCCACACCTCCATCGAATCCTTGCCGTATTCGATGGCCTATCGATTCATCTATCACAACTGCTTGCCGCCGGTTGGATATTCGGTTGCTGTCCGTAACGGGAGCTCTAGGTTTTTGTATGGTGGACCTCACTGCAACAATTACTGTCACTGA 567 0.5026 MESKPRSTKRPTIKFLCSYGGKILPRVTDGKLRYVGGHTRVLAVEPSISYSELMVKLGELCGSSVTLRCPLPNGDLETLISITSDEDLRNIIEEYDRASSSLAHPLKVRAILSPPKSLKRASPASSSASSANQSPSRSPHTSIESLPYSMAYRFIYHNCLPPVGYSVAVRNGSSRFLYGGPHCNNYCH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1336 188 PANTHER OS05G0427100 PROTEIN-RELATED 3 135 - -
Glsi13g1336 188 MobiDBLite consensus disorder prediction 115 142 - -
Glsi13g1336 188 MobiDBLite consensus disorder prediction 119 142 - -
Glsi13g1336 188 SUPERFAMILY CAD & PB1 domains 29 121 - -
Glsi13g1336 188 Gene3D - 31 110 - -
Glsi13g1336 188 SMART PB1_new 27 115 IPR000270 GO:0005515
Glsi13g1336 188 Pfam PB1 domain 29 99 IPR000270 GO:0005515
Glsi13g1336 188 CDD PB1_UP2 16 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1336 Glsi-ChrGlsi13 30701234 30701891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1336 13 100 MAP Kinase Kinase Kinase AT5G57610 50.000 4.60e-25 99.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0646 02 4212474 4213281 Glsi13g1336 13 30701234 30701891 CCT
Glsi13g1336 13 30701234 30701891 Glsi13g1336 13 30701234 30701891 ECH