Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1335 ATGGAAGACGAAGATCACCAACCAACAGAGGCGAAGGATTACTATACTAGATCATTATGGTGGACTGAAACTGTCACTAGTAACGGAGAAGGAGTTAATGGCATCTACATGCCCGTTGGCAAAGATAACTTGGACTACAACTCTAAAGAAATAATAACCCCAGAAATTTCTGAGACACTGGAAGACAACAGCTATTCTGGGGCTGGTGGCATGGAACATTATTCTGGAGGACGAATATGGTCTTCAGAAATTGTGGAAGTAGTTGAGGATGGGAAGAGCATAACAAGTGTTCAAGAGAGAAGAGATGATGACATTTATGTGGCTGTTGGCAAAGATGACTCGGATGTAGTGAAATGGGCTCTTGATCATGCCGTTTCTCCTGGTGCCCGGATTTTTCTTATCCATGTCTCTCCTCCAATCACATTGATTCCAACGCCAGTTGGCATGTTATTAAGAAGCCAATTGACCCCGGAACAAGTGAGAGTTTATATGAATGAAGAGAACAACAGGAGGAAAAATCTTCTGCAGAATTACATCCAGTTGAGTACTGATACCAAGATAATAGCGGACGCATTGCTTCTGGAGAGCAACGACACAGGCAAAGCAATCCTGGATCTTATCCCTATTCTTAACATCACCAATCTTATCATCGGAATCAAAAAGCCACCCAACTCGCGGCACAAGAACAAATTGAGCGAAGGAGAATTTGTGAAGAAAAATGCACCAGAGTTCTGTGCAGTTACTTTGGTTTATAATGGCAATAAGGTTGTGAACAACCAATACATGGATGGATTGGAATCTCTTGGCCTATTATCAAAACACAGAAACCACTCAAAAAGGAACTTCTTTCACTGTATGTGCTTTTCAGGGTGCACAAGTAAAGTGAAGGATTAG 894 0.4183 MEDEDHQPTEAKDYYTRSLWWTETVTSNGEGVNGIYMPVGKDNLDYNSKEIITPEISETLEDNSYSGAGGMEHYSGGRIWSSEIVEVVEDGKSITSVQERRDDDIYVAVGKDDSDVVKWALDHAVSPGARIFLIHVSPPITLIPTPVGMLLRSQLTPEQVRVYMNEENNRRKNLLQNYIQLSTDTKIIADALLLESNDTGKAILDLIPILNITNLIIGIKKPPNSRHKNKLSEGEFVKKNAPEFCAVTLVYNGNKVVNNQYMDGLESLGLLSKHRNHSKRNFFHCMCFSGCTSKVKD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1335 297 Coils Coil 164 184 - -
Glsi13g1335 297 Gene3D HUPs 104 232 IPR014729 -
Glsi13g1335 297 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 43 291 - -
Glsi13g1335 297 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 108 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1335 Glsi-ChrGlsi13 30696393 30698445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1335 102 267 U-box Gene Family AT2G45910 27.168 1.44e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0651 02 4235837 4236277 Glsi13g1335 13 30696393 30698445 CCT
Glsi02g0651 02 4235837 4236277 Glsi13g1335 13 30696393 30698445 ECH
Glsi13g1335 13 30696393 30698445 Glsi13g1335 13 30696393 30698445 ECH