Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1300 ATGCAGAGCACAGCCTTCACCCTCTCTCCTTCCCTTCCTCTTCTCAAACCTCGCACACCTTGTGGTGCTGCGCTCACCACCTCCTCCCGCTTCGATCCCATACGTCTCTCTGCTTCCTCTACCAAACCCAATGAAAGCTTCTCCTCCTCCAATGCCGCCTGCTCCTCCCCCTCTTTCACCCGTCGATCATGGTCCCTTGCTTCTTCCTCCGGCTTTCAATTCAGGCCTTGGTCATCCTTCTCCACCCTTGCTTCCTCCGATCCCGATGCCGCTCGTCTTGAGGCCAGGGCTGCTTCCGTGCCTGAGAGTGCCGGGGAGAGCAGCAGCGATGCCTCCAGCTCTTTGTTCAAAACGCTGGAGCTTGGAGCCTTGTTTGGTCTCTGGTACCTCTTCAATATCTACTTCAACATCTACAACAAGCAGGTCTTGAAGGTGTTCCATTTCCCAGTGACCGTCACTACAGTTCAATTTGCCGTTGGGACTGTCCTTGTATTATTTATGTGGGGTTTTAATCTATATAAAAGGCCTAAAATCAGCAGTGCCCAGCTTGCAGCAATATTGCCACTGGCTGTGGTACATACTTTAGGGAACCTTTTCACAAATATGAGTCTTGGAAAGGTGGCCGTGTCTTTCACTCACACAATCAAAGCAATGGAACCTTTCTTTTCAGTGGTCCTTTCTGCTATGTTCCTTGGAGAGATGCCTACTCCATGGGTGGTTGCTTCCCTAATGCCTATTGTTGGTGGAGTGGCACTGGCATCAGCTACTGAGGCCTCCTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACAAATCAGTCTCGCAATGTGCTTAGCAAAAAAGTCATGGTTAAGAAAGAGGATTCTATGGACAACATAACCCTCTTCTCAATAATAACGGTTATGTCCTTCTTCTTGTTAGCACCTGTGGCTGTATTCATGGAGGGTGTCAAATTTACCCCTGCATACCTGCAATCTACTGGGTTGAATGTTAGACAAGTATACATCAAATCACTTCTTGCTGCGCTGTGTTTCCATGCATATCAGCAAGTTTCTTATATGATATTGCAGAGGGTATCACCTGTTACCCACTCTGTGGGCAATTGTGTGAAGCGGGTCGTGGTCATTGTGAGCTCTGTCATCATCTTCCAAACACCTGTCTCACTTATTAACTCTTTTGGGACTGGCATAGCTCTTACTGGCGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGCCAAAGCCAAAGACAGCGTAA 1266 0.4795 MQSTAFTLSPSLPLLKPRTPCGAALTTSSRFDPIRLSASSTKPNESFSSSNAACSSPSFTRRSWSLASSSGFQFRPWSSFSTLASSDPDAARLEARAASVPESAGESSSDASSSLFKTLELGALFGLWYLFNIYFNIYNKQVLKVFHFPVTVTTVQFAVGTVLVLFMWGFNLYKRPKISSAQLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEMPTPWVVASLMPIVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKVMVKKEDSMDNITLFSIITVMSFFLLAPVAVFMEGVKFTPAYLQSTGLNVRQVYIKSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFQTPVSLINSFGTGIALTGVFLYSRVKRIKPKPKTA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1300 421 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 119 419 IPR004696 GO:0016020|GO:0022857|GO:0055085
Glsi13g1300 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 164 254 - -
Glsi13g1300 421 PANTHER SOLUTE CARRIER FAMILY 35 120 413 - -
Glsi13g1300 421 Pfam Triose-phosphate Transporter family 120 409 IPR004853 -
Glsi13g1300 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 333 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1300 Glsi-ChrGlsi13 30413410 30416887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1300 1 421 Antiporters AT5G33320 71.801 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0695 02 4517112 4519944 Glsi13g1300 13 30413410 30416887 CCT
Glsi02g0695 02 4517112 4519944 Glsi13g1300 13 30413410 30416887 ECH
Glsi13g1300 13 30413410 30416887 Glsi13g1300 13 30413410 30416887 ECH