Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1298 ATGGAAGAAACTTTTGTTCCCTTCCAAGGGATCAAGAATGACCTCAAAGGAAGAATTGTGTGCTACAAAGAAGATTGGACCAGTGGTTTACAAGCGGGTATCAGGATTCTTGCCCCGACAACATACATATTTTTTGCTTCCGCAATTCCAGTTATTTCTTTTGGGGAGCAACTGGAGAGAAATACGGATGGAACTCTGACTGCAGTGCAAACTCTTGCATCAACGGCACTCTGCGGCATTATCCACTCAATCCTGGGAGGGCAGCCTCTTCTCATACTAGGTGTAGCTGAGCCGACTGTTCTGATGTATACATTTATGTATGACTTTGCAAAGGATCGAAAGGATTTGGGGCACAAGCTCTTCCTTCCTTGGACTGGATGGGTGTGTGTATGGACAGCCTTCTTGCTCTTCACTCTGGCGATTCTTGGTGCATGCTCCATTATCAGAAGATTCACACGCCTTGCTGGTGAACTATTTGGTCTACTAATTGCAATGCTCTTTATGCAGCAGGCCATAAAGGGAGTTGTGGAAGAGTTTGGTGTACCCAAGAACCAGAGAGAGGGTACCAATCAGATTGCAAACCAATTATCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTTTTTACAGCACTACAAAGTCGTAAAGCTAGATCCTGGCGTTATGGGACAGGTTGGCTACGGGGATTTATAGCTGATTATGGAGTCCCACTATTGGTGCTTGTGTGGACTGCTGTATCTTACACACCGGTCAATAAGGTCCCTGCGGGAATCCCTAGGCGACTCTTTAGTCCGAATCCATGGTCTCCTGGTGCATACTCAAACTGGACAGTTATCAAGGAAATGTTGGATGTTCCACCCTTGTATATTATTGGAGCATTTATACCAGCGACTATGATCGCCGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCCCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCTTCCTATCACTATGACCTTCTTCTTTTGGGCTTTTTGACCATGTTGTGTGGGCTTATTGGAATTCCCCCTTCCAATGGTGTTATTCCACAATCTCCAATGCATACAAAAAGCTTAGCTACTCTAAAACATCAGCTTTTGAGGAGCAAGCTTGTATCTACTGCACGAAAAAGTATGCGGAAAAATCTGAATTTAAGTCAGTTATATCAGAATATGCAAGAAGCATATGATGAAATGCACACTCCACTGGTCCACCAAATGCCACCTGCCCTGAGGTTGAAGGAGCTGAAGGAGTCCACCATCCAACTTGCTTCAAGTGAAGGATACATTGATGCCCCAGTTGATGAGATTGTTTTTGATGTGGAAAAGGATGTTGATGATCTTTTGCCTATTGAAGTTAAAGAACAGCGCCTTAGCAATTTGCTGCAGGCATTGATGGTTGTTGGTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTTCTATGGGGCTACTTCGCTTTCATGGCAATTGAAAGTCTGCCTGGAAATCAGTTTTGGGATAGAATATTGTTTCTGTTCACTGCTCCAAATCGAAGATACAAGGTGCTGGAGAAATCCCATGCGACCTTTATTGAGACTGTGCCCTTCAAAACAGTTGCCATGTTTACCTTGTTCCAAACAGCTTACTTGCTTGCATGCTTTGGCATAACCTGGATACCAATTGCTGGGGTCCTTTTCCCATTGCTAATCATGCTTCTTGTCCCAGTACGGCAATATGTCCTTCCTAAGTTTTTCAAAGGAGCTCATCTTCAAGACTTGGATGCTGCAGCATACGAGGAAGCCCCAGCTGTTGCTTTCAACATGTCATTTGAAGATACAAATAGTCAGGCTCAGGCCACAACTGTCAACATTAGTGATGGGGAAATTCTTGATGAAATTATTACAAGGAGCCGTGGTGAGATTCGTGGCATTCACAGCCCAAAAACATCAAGTTCGACACCAACTTCATTTGGAGATATAAGACCTGCTAATAGTCCTCAGATATCGCGAAGGATGCACAGCCCTCGAGTAGCTGAACTAAGAGGGGAAAGTACCTTAGGATCAACCAGAAAAGAGATCAAGTTAAGGCAAACTCCTAGTCCACAGCCATCAATTCCTAGACAAGATACTAATGATTCACCTTCAAGCTAA 2175 0.4382 MEETFVPFQGIKNDLKGRIVCYKEDWTSGLQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFMYDFAKDRKDLGHKLFLPWTGWVCVWTAFLLFTLAILGACSIIRRFTRLAGELFGLLIAMLFMQQAIKGVVEEFGVPKNQREGTNQIANQLSWLFGNGMFALVLSFGLLFTALQSRKARSWRYGTGWLRGFIADYGVPLLVLVWTAVSYTPVNKVPAGIPRRLFSPNPWSPGAYSNWTVIKEMLDVPPLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTMLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRSKLVSTARKSMRKNLNLSQLYQNMQEAYDEMHTPLVHQMPPALRLKELKESTIQLASSEGYIDAPVDEIVFDVEKDVDDLLPIEVKEQRLSNLLQALMVVGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWDRILFLFTAPNRRYKVLEKSHATFIETVPFKTVAMFTLFQTAYLLACFGITWIPIAGVLFPLLIMLLVPVRQYVLPKFFKGAHLQDLDAAAYEEAPAVAFNMSFEDTNSQAQATTVNISDGEILDEIITRSRGEIRGIHSPKTSSSTPTSFGDIRPANSPQISRRMHSPRVAELRGESTLGSTRKEIKLRQTPSPQPSIPRQDTNDSPSS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1298 724 Gene3D Helical hairpin bin 18 60 - -
Glsi13g1298 724 MobiDBLite consensus disorder prediction 699 724 - -
Glsi13g1298 724 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Glsi13g1298 724 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Glsi13g1298 724 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Glsi13g1298 724 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Glsi13g1298 724 MobiDBLite consensus disorder prediction 648 724 - -
Glsi13g1298 724 FunFam probable boron transporter 2 18 60 - -
Glsi13g1298 724 MobiDBLite consensus disorder prediction 652 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1298 Glsi-ChrGlsi13 30402334 30406722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1298 1 691 Antiporters AT3G62270 74.964 0.0 1054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0699 02 4532037 4536840 Glsi13g1298 13 30402334 30406722 CCT
Glsi13g1298 13 30402334 30406722 Glsi13g1298 13 30402334 30406722 ECH