Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1274 ATGGGGATGGAGATCGTCATTTCTTTGATACTCTTGTTTGTGGGTATCGCCGTTTTGGTGTCGATCCATGTGTGCATCGTGGGGAGGGCTTTCCGAAGAAGTAATCAGGGTGGAAATGCAGAGCACCAAAATAGAGATGGAATTGGCACCAAGAGAATGTCCGGAGACGACCTGGAAAACCTTCCTTGCTTTGACTATAAGGAAGCAGAAAAAGGAGCAAGCCCTGTGGATTGTGCTGTTTGCTTAGACAACTTCAAGGATGGTGATGTGTGCAGGTTTTTGCCTAATTGTAGCCACAGCTTCCACGTACAGTGCATAGACTCGTGGATACTGAAGACACCCATTTGTCCAATTTGTCGAACATGGGTACATTTGCCCATGATTCCGACGGTTCTGAACGAAGAAATTGCTGTTTCAGATCATGCTGGAATTGAAGTGTTATAG 444 0.4572 MGMEIVISLILLFVGIAVLVSIHVCIVGRAFRRSNQGGNAEHQNRDGIGTKRMSGDDLENLPCFDYKEAEKGASPVDCAVCLDNFKDGDVCRFLPNCSHSFHVQCIDSWILKTPICPICRTWVHLPMIPTVLNEEIAVSDHAGIEVL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1274 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 125 IPR013083 -
Glsi13g1274 147 SUPERFAMILY RING/U-box 77 126 - -
Glsi13g1274 147 SMART ring_2 78 119 IPR001841 -
Glsi13g1274 147 ProSiteProfiles Zinc finger RING-type profile. 78 120 IPR001841 -
Glsi13g1274 147 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 124 - -
Glsi13g1274 147 FunFam RING-H2 finger protein ATL2K 53 126 - -
Glsi13g1274 147 Pfam Ring finger domain 77 120 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1274 Glsi-ChrGlsi13 30155076 30155519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1274 44 132 C3H Transcription Factor Family AT4G28890 36.957 7.13e-18 77.0