Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1270 ATGATGATGAATAAGTCTGGCCTTCCCGGATACCCAGCTTCTTCTTCGTTTGGATTCCGAAGCCATTTCCCAAAATCCTTCTCTCTGAGAAAGAAAGTCCCATGGTGGTACCAAATCCTCGACCCCAAGTCCAAATTCGTTGACCAATGGAATCGCACCTTCCTTTTTGCCTGCTTCGCTGCTCTCTTTCTCGACCCTCTCTATTTCTATTTCCCCATCATTGGTGGCGAGGCTTGCATGAAAATTGACTTGGCCCTTGGCGTCTTCGTCACTTTTTTCCGCACTGTCACCGATTTCTTCTTCCTCTTCCACATCGTCATCAAGTTTCGTACAGCCTACACTCCTTCCACTTCTTTCGGCCGCGGTGAGCTCGTCACCGACCCCTACCTCATTGCCATTCGCTATCTCAAGAAAGATTTCACCATTGATCTTCTCTCCGCCCTTCCTCTGCCTCAGACAGTGATTTGGTTCGTCATTCCGGCATTGAAAGATACAACAGCAGCTTATGCGAATCACACTCTGTCTCTGATTGTTCTCCTTCAGTACATTCCTCGATTCTTTCAGATTTTCCCTCTGCAACGCCGGATTATAAAAACTAGTGGGCTCATAACCAAGTCTGCTTTGGCAGGGTCTTTATACAATCTTGGTTTTTACGTGTTGGCCAGCCATATTTTAGGGGCTGCGTATTATGTGTTGGCCATTCAGCGTCAGTTTGAATGCTGGAAATTAGCTTGTGGAGAGGAGATGAATGGAACACATTCTCCATCTTGTTCGCTTCTGTTTCTTAGTTGCGATAGTTTGGGCAATCCTGAACGGGAAGCTTGGTTCAGCAAAACTAAACTTCTCACGGACTGTGATGCTAGGGATAAAGGCAACTCCTTTGAGTTTGGAATGTACTCTGATGCTTTTACTGATGAAGTTGCTTCGTCAAGGTTCATCGAAAAGTACTTTTATTGCCTCTGGTGGGGTTTGAAAAGTCTAAGTGCATATGGACAAAATATAGAAACAAGTGTCCACAGTTCCGAAACTTTATTTGGCAGTTGCATCTGCGTCGCAGGTCTAACTCTGTTTGCGCTTCTCATTGGTAACATGCAGAACTATCTGCAATCTACCACTGCAAGACTTGAAGAATGGAGGGTTAAACAAAGAGATACAGAAGAGTGGATGAGGCATCGCCAACTTCCACCGGAACTGCAAGAACGTGTTCGTCGGTTTGTTCAATATAAATGGCTAGCCACTAGAGGTGTTGATGAAGAAACTATTTTGCGCGCTTTGCCTTTGGACATTCGGCGTCAGATCCAGAGGCATCTTTGTCTTGCTCTAGTTCGTCGGGTTCCTTTTTTTGGCCAAATGGATGATCAGCTGCTAGATGCCATATGCGAACGGCTTGTGTCATCATTGAACACGAAAGACACGTACATAGTAAGGGAAGGAGACCCAGTAAAAGAGATGCTTTTCATCATTAGAGGACAAGTAGAGAGCTCCACAACAGATGGGGGGAGGTCAGGATTCTTCAATTCTATAACTCTTAGACCAGGTGACTTTTGTGGCGAAGAATTGCTGACATGGGCTTTGGTGCCTACTTCTAGTCTTAACCTTCCATCCTCCACTCGAACTGCTAAGTGCCTGACTGAAGTGGAAGGATTCGCACTTAAAGCAGAAGATCTCAAGTTTTTTGCCATCCAGTTCAAGCGACTCCACAGCAAGAAAATCCAGCATGCTTTCAGGTACTATTCCCACCAGTGGAGGGCTTGGGGAGCTTGCTTTATACAAGCTGCTTGGAGACGCCATAGAAAGAGAAAATTGGCAATGGAGCTGTTGGAAAAAGAGAACCTGTACCCAGATGAGGAGGGATCAGCAGATTTAGATGATGACGAATCTGGGGGTGGGGAGAGCCCAACGGGGGATAAAACAAGCCGTGCCAAGCACCTTGCGGCTACAGTTTTGGCCTCAAAATTTGCTGCAAACACTAGAAGAGGGGCACTTCAGAAAGTCTCAATCCCTGAATCCGACAGCTTGAAGATGCCCAAGTTGTTTAAGCCAACAGACCCTGACTTCTCAGCAGAGTAG 2070 0.4614 MMMNKSGLPGYPASSSFGFRSHFPKSFSLRKKVPWWYQILDPKSKFVDQWNRTFLFACFAALFLDPLYFYFPIIGGEACMKIDLALGVFVTFFRTVTDFFFLFHIVIKFRTAYTPSTSFGRGELVTDPYLIAIRYLKKDFTIDLLSALPLPQTVIWFVIPALKDTTAAYANHTLSLIVLLQYIPRFFQIFPLQRRIIKTSGLITKSALAGSLYNLGFYVLASHILGAAYYVLAIQRQFECWKLACGEEMNGTHSPSCSLLFLSCDSLGNPEREAWFSKTKLLTDCDARDKGNSFEFGMYSDAFTDEVASSRFIEKYFYCLWWGLKSLSAYGQNIETSVHSSETLFGSCICVAGLTLFALLIGNMQNYLQSTTARLEEWRVKQRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEETILRALPLDIRRQIQRHLCLALVRRVPFFGQMDDQLLDAICERLVSSLNTKDTYIVREGDPVKEMLFIIRGQVESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPTSSLNLPSSTRTAKCLTEVEGFALKAEDLKFFAIQFKRLHSKKIQHAFRYYSHQWRAWGACFIQAAWRRHRKRKLAMELLEKENLYPDEEGSADLDDDESGGGESPTGDKTSRAKHLAATVLASKFAANTRRGALQKVSIPESDSLKMPKLFKPTDPDFSAE 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1270 689 Gene3D - 68 371 - -
Glsi13g1270 689 SUPERFAMILY Voltage-gated potassium channels 42 369 - -
Glsi13g1270 689 CDD CAP_ED 447 578 IPR000595 -
Glsi13g1270 689 FunFam Cyclic nucleotide-gated ion channel 1 374 438 - -
Glsi13g1270 689 FunFam Cyclic nucleotide-gated ion channel 1 445 563 - -
Glsi13g1270 689 Gene3D Helix hairpin bin 373 438 - -
Glsi13g1270 689 SMART cnmp_10 447 578 IPR000595 -
Glsi13g1270 689 SUPERFAMILY cAMP-binding domain-like 376 570 IPR018490 -
Glsi13g1270 689 MobiDBLite consensus disorder prediction 615 642 - -
Glsi13g1270 689 ProSiteProfiles cAMP/cGMP binding motif profile. 447 540 IPR000595 -
Glsi13g1270 689 Pfam Cyclic nucleotide-binding domain 470 557 IPR000595 -
Glsi13g1270 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 32 686 - -
Glsi13g1270 689 Pfam Ion transport protein 50 374 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Glsi13g1270 689 Gene3D Jelly Rolls 445 565 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1270 Glsi-ChrGlsi13 30128864 30131740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1270 15 686 Ion Channels AT3G48010 63.808 0.0 896