Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1256 ATGTCGCAGAAGAGGCGCCCCGAAGATGGCAAGGCAAAATCAGAGTGTGGCAGTCCAGAGGATAAGCGTAGAAAGGGCCCAGCTTTTACCAATGTGGTGCGTGAGGTGATGAAGTTACATTCAGTCCGGAATCTGCTGGAGCCAATTCTGGAGCCCTTGATTCGTCGAGTGGTTAAGGAGGAAGTTGAATTGGCCCTAAGGAAGCATTTAGCCAGCATGAAACAGACCTATGGAAAGGAGATCCATACTTATGAATCAAGAAGTCTGCAGCTGCAGTTCGAAAACAACATATCCCTTCCAGTCTTTACTGGAGCTCGAATTGAAGGAGAGGATGGCTCCAACATAAGGATAGGTTTAGTTGATGCCCTGAAGGGGCAGGTTGTTATTTCAGGACCTGAATCTTCAGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGATGAAAGTGAAATTTGGATGCCAGAAGATTTCAAAAACAACATCGTAAGGGAGAGAGAAGGAAAAAAGGCTCTTCTTACGGGAGATGTAAGTTTGCATCTTAAAGATGGGATTGGTATGGTGGGTGATATTTCATTTACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCAGGCTTGGGGCAAGAGTTGTGGATAACTTTGATGGAATTAGAATAAGAGAAGCAAAGTCGGAGTCGTTTATTGTCAGGGATCACCGAGGAGAATTGTACAAGAAACACCACCCTCCTAGTTTGTTCGATGAAGTTTGGAGATTGGAAAAGATTGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAAATCAGTACTGTGAAGGATTTTCTCACACTTCTCAATCTAGACCCAGCAAGGCTACGCAGTATACTGGGCACAGGTATGTCAGCAAAGATGTGGGAAGTAACGGTGGAGCATGCTCGAACATGTGTACTTGATACGAGGAGATACCTGTACTTCCCTTCTCATTCTCAACCAAAAACTGGTGTGGTCTTCAATGCTGTGGGACAGGTGACAGGGCTGCTCTCTGAATGCCAGTATGTCCCTGTAGATAAGCTGTCTGAGACGGAAAAGGCCGATGCTCAAAATTCAGTAATTTCTGCATTCAAACCAGGGGAGAATGTCGCCTCTTTTGAGGATGAAACCTCTCTGATGGATGGGTCTTCACACTTGACTAATGCACTTCACTCCCCATGCTCACCCAAGACAGAGGGATCTAGTGCTAACAAGGTTTTGGCTCCATACCAGACTGGTGGTGGACTTGATTACACTCAAGCAAGTGCCTCGTCTCCAGATATCATGTCATCTATCTATTCTGTTGGGGGGACTAGTGGCTTGGATGACTATTGCTTGCCTAATATAGACAGCGTGGGTCTTAGATATGACCACACTCTTGGTTTTCCGGTCCAAATTAGCAACTCTTTGATCTGTGAAACAGATGCAATGGTCCATGCTTTTGTCGGTGAAGATCATTTACAATTTTTTGATGCTGATATTCAGTCTCAGTGCCACATTCTGGAATCACAAGCAGATTTGCAGAGTGCTGTTGATGGGTTCATGCTGGCGCGTTCTACAGCATTGGCCATGGATAAAGCTCAGAGGAGATGGAGAAAGCTGTTCAACGTCCTAAAATGGTTCATGGTGAGGAATATTGAATCAAAAAGAAGTCGAGTGCGAGATAGCGAAAGATACATCAAAGGGTTGTGA 1713 0.4501 MSQKRRPEDGKAKSECGSPEDKRRKGPAFTNVVREVMKLHSVRNLLEPILEPLIRRVVKEEVELALRKHLASMKQTYGKEIHTYESRSLQLQFENNISLPVFTGARIEGEDGSNIRIGLVDALKGQVVISGPESSAKVEIVVLEGDFEDESEIWMPEDFKNNIVREREGKKALLTGDVSLHLKDGIGMVGDISFTDNSSWTRSRRFRLGARVVDNFDGIRIREAKSESFIVRDHRGELYKKHHPPSLFDEVWRLEKIGKDGAFHKRLSREKISTVKDFLTLLNLDPARLRSILGTGMSAKMWEVTVEHARTCVLDTRRYLYFPSHSQPKTGVVFNAVGQVTGLLSECQYVPVDKLSETEKADAQNSVISAFKPGENVASFEDETSLMDGSSHLTNALHSPCSPKTEGSSANKVLAPYQTGGGLDYTQASASSPDIMSSIYSVGGTSGLDDYCLPNIDSVGLRYDHTLGFPVQISNSLICETDAMVHAFVGEDHLQFFDADIQSQCHILESQADLQSAVDGFMLARSTALAMDKAQRRWRKLFNVLKWFMVRNIESKRSRVRDSERYIKGL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1256 570 PANTHER OS02G0177800 PROTEIN 4 425 IPR012416 GO:0005516
Glsi13g1256 570 Pfam Calmodulin binding protein-like N-terminal domain 89 234 IPR046831 -
Glsi13g1256 570 Pfam Calmodulin binding protein central domain 247 312 IPR046830 -
Glsi13g1256 570 MobiDBLite consensus disorder prediction 1 28 - -
Glsi13g1256 570 Pfam Calmodulin binding protein C-terminal domain 318 379 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1256 Glsi-ChrGlsi13 30040003 30043470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1256 1 361 Calmodulin-binding Proteins AT5G62570 64.820 3.16e-167 478