Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1233 ATGTCTACCCCTAGTCATGCAATTGCAAAGGCTGTGGCTGCTTCAGCTGCAGTTATGTTATTTATTGCAGGTATTTTCTTTTACTTCTTCCATAAATTTGCTATCTCTCGGTACCACCAAAGACACAAAGTTGCTGCTAGTTTTCTTCGAGAATCAGGGGTGAACCACGAGGAGATAAAGAAAGTTACGAGTAATGTGAAAGGATTAGTCGTTGAAGAAAACGGGATTGATATTCTTTACATGATGGAAACAGATGGAAGACGACTGAAAACTAGATTTCCCAATAGTAGGTTTAATCCGAGTTATGAAGAAGAAGGAGGAAAGAAAATAGATGTCATGGCACAAACATCATTAAGGTTTAAGCCTCAGGAGTTTCCACTACCATGTGAACCTCCTTGCGTGATTGCTCATGATGATCTAGTTAAACCAGTATCACAAGTACCTACTCTGCCTTCTTCAGTTTCAGCCTCACCGCCACCAAGGCAAGAAGTGTCACAATCACCTCAGCTACCACCATCGCCAAAGGTTCTTGAGAAGAAAACACCACCACCACCACCTCCTCCTCCTCCTCCACCACCACCACCTCCTCCCCCTCCTCCTCCACCACCACCACCCCCATCCCCTCCAAGAAAGGAAGTTCCAAAGGTGCCCCTTAAGCCTTCATTTCTTCCTCTATACAGAGCAGGTGCAGCCCTACCGCCTCCGCCTCCAAAAACTAGCGGCTTCACTTCATCGTTCACTTCATCGTTAAAACCCTTCCCTGCACCTCAAGGGAAAGCAGACTTCAAGAACCCCAAAGAGGGTACCGTAGGGGAGAGCTCGAGAGAGAAAGGTAGTGGCCCAAAGAGGCTGAAGCCACTGCACTGGGATAAGGTTGTATCTAATAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCAGGTTTGATGATCAACTCATGGTAACACTGTTCGGATATTCAACCGACAATAAAAACCATGCGAGAAATAGAAGTCTGTCTACTAAGTCCAACTCCACTCCACCAACTCCACAATTCATTCTGGAGCCCAGAAAATCCCAAAACACAGCAATTGTGCTAAAGTCTCTTGCACTTTCTCGCAAAGGGATCCTTGATGCCCTCCTTGATGGCCAGGGACTCACTGCTGACACACTTGAAAGACTCACCAAAATAGCTCCAACACAAGAAGAAGAAGCCAAAATTATCCAATTCAATGGCAACCCAGATAAACTAGCAGATGCTGAATCTTTCCTCTACTACATCTTAAAAGCAGTTCCAACAGCATTTACTCGTTTGAAAGCAATGCTTTTCAGATCAACTTATGATTGTGAAGTATTGCAGCTTAAAGAACACTTGCAAACACTTGAAATGGGCTGTAAGGAGCTGAGGACTAGTGCTCTCTTTTTGAAACTACTAGAGGCCATTCTCAAAGCCGGGAACCGGATGAATGCTGGAACTTCCAGAGGCAATGCACAAGGTTTCAACCTATGCTCTCTTAGAAAGCTTTCTGATGTAAAAAGTACAGATGGGAAGACTAGTTTGCTTCACTTCATTGTGGAACAAGTAGTTCAGTCTGAAGGAAGACGAGAAGCTATCAATCAAAAGCACAACCTTCGCAGAAGCAATAGTGAAACAAGAAACATTAATGGAGACAAAGATTATCTAATGCTTGGCTTACCAGTGTTAGGGGGGTTAAGTGATGAGTTATCTGAAGTAAAGAAAGCAGCCAACATAGAGCATCACAGTTTCATCAGTGTTTGCTCCACTGTGAATGCTCATGTGATCGAAATTCGCCAGATTATGACATGCTGTGGTGACAGTGAGAGAGGGGGGTTTATCAAGGAAATGAAAGGGTTCTTAGAGGAATGTGAGGAGGAGTTAAAGGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGGTTGTGAAAAAAACGAACGAGTATTATCTAGCAGGAGGATCCAGAGACAATATGTCAAACCCCTTTAATCTGTTCGTTATTGTAAAAGATTTTGTTGACATGGTAGATCAGGCTTGCATAGAACTTAAGAAGAAGCTAGAAAAGAAGAATGTAGAAACTGTATCAACACCACCTGTGTCACCATCAAAGAGAGCGCCAGTCAGATTTCCAAACTTCGATTTCCATTTTCTGTCAAATTATTCAGCATCAACATCTTCCAGCCAATCAGAGGACGATTTCTGA 2211 0.4342 MSTPSHAIAKAVAASAAVMLFIAGIFFYFFHKFAISRYHQRHKVAASFLRESGVNHEEIKKVTSNVKGLVVEENGIDILYMMETDGRRLKTRFPNSRFNPSYEEEGGKKIDVMAQTSLRFKPQEFPLPCEPPCVIAHDDLVKPVSQVPTLPSSVSASPPPRQEVSQSPQLPPSPKVLEKKTPPPPPPPPPPPPPPPPPPPPPPPPPSPPRKEVPKVPLKPSFLPLYRAGAALPPPPPKTSGFTSSFTSSLKPFPAPQGKADFKNPKEGTVGESSREKGSGPKRLKPLHWDKVVSNNVDHSTVWDQINDGSFRFDDQLMVTLFGYSTDNKNHARNRSLSTKSNSTPPTPQFILEPRKSQNTAIVLKSLALSRKGILDALLDGQGLTADTLERLTKIAPTQEEEAKIIQFNGNPDKLADAESFLYYILKAVPTAFTRLKAMLFRSTYDCEVLQLKEHLQTLEMGCKELRTSALFLKLLEAILKAGNRMNAGTSRGNAQGFNLCSLRKLSDVKSTDGKTSLLHFIVEQVVQSEGRREAINQKHNLRRSNSETRNINGDKDYLMLGLPVLGGLSDELSEVKKAANIEHHSFISVCSTVNAHVIEIRQIMTCCGDSERGGFIKEMKGFLEECEEELKVVKEEQTRIMEVVKKTNEYYLAGGSRDNMSNPFNLFVIVKDFVDMVDQACIELKKKLEKKNVETVSTPPVSPSKRAPVRFPNFDFHFLSNYSASTSSSQSEDDF 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1233 736 MobiDBLite consensus disorder prediction 330 352 - -
Glsi13g1233 736 SUPERFAMILY Formin homology 2 domain (FH2 domain) 287 692 - -
Glsi13g1233 736 PANTHER FORMIN-RELATED 4 716 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Glsi13g1233 736 SMART it6_source 274 693 IPR015425 -
Glsi13g1233 736 MobiDBLite consensus disorder prediction 146 172 - -
Glsi13g1233 736 Coils Coil 617 644 - -
Glsi13g1233 736 MobiDBLite consensus disorder prediction 175 215 - -
Glsi13g1233 736 Pfam Formin Homology 2 Domain 282 678 IPR015425 -
Glsi13g1233 736 MobiDBLite consensus disorder prediction 146 285 - -
Glsi13g1233 736 ProSiteProfiles Formin homology-2 (FH2) domain profile. 274 704 IPR015425 -
Glsi13g1233 736 MobiDBLite consensus disorder prediction 265 285 - -
Glsi13g1233 736 Gene3D Formin, FH2 domain 295 698 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1233 Glsi-ChrGlsi13 29732442 29734746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1233 8 734 FH2 protein (formin) Gene Family AT1G70140 39.221 8.20e-150 453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1233 13 29732442 29734746 Glsi13g1233 13 29732442 29734746 ECH