Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1206 ATGTCCCAAGGATCTCTTCCTCCTCCTCCTCCGATTCCCAGCGAACCCTGCAACCGAGGATCCTCGCCTGAACCCAATTCCCAAAACCGCATCCCCGATTCCCAGAACGGCATCCCCACTTCTAAGGAGGAAACCACAACCGCTCCCACCACTACAAGGAGCAATCGGCCGTCGCGGGCGTGTACCATTCGTGCTGCGTCTCGTCTTTATTCAACGGTCCAGCCGGCGATCCAACGGAAGTCCAAAGCTGCGAAGAAGGAGCAGAGGCGGGAAGACTCGCCGACCCAACAGCAGCAGCAGCAATGCAGCAAGATCGTGACGCCGCTAGTGGAACCTCCCTCACCGACGCAGCTGCCTCGTTGGAACCTACGGTCCATGTGGGAGCTAGCTTCAGTACTAAATTTCTTGCATGTATTTAGGCCGCTTTTGAATATTTCAGTAGAATTCTCGGCAGAAGAGTTCGAGACAGCTCTCCTTATGCCTAACGACACATTGAGTGATATACATATGCCTTTGTTAAAGGCGATCCCTCCCATTACAAGAATGGCACTCACACGTGATACTTGGATAACTGTATTATGCAGAAAATTGAGAGACTGGTGGCTGTGGGTTGCTGATGGGGAAGTTCCAATTGTTGCTTCACATGGGGCGGAGGTTGAAGCATATAAATCACTTGATCCAGGGATCCGTGTTATCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATACGAAGTTATATTGACAACTCACTCAGACATGGTGTTCAACTTTCAACATTCCGTAAAGAGCGTATTGGGGGTGATTCACATGGAGTTTCTTATTGGTATGAAGATGACCCAGTTGTTGGTCATAGATTGTATCGTGAAATAAGGAAAACTGAAGTGGTTCAAGTGAAGAAAGGGAAGGCAAAAGGTTCACAGGTCCTATCTAGTACATCATACCAGTGGGAAGCTGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGATAAGCTTTTCTCAAGTAAAAACAGAACTGAGGCTTCTGTAGGGAAAAAACTGAAGATAGACATGCTTCCTGAGATCGAGAAAGTTCATAAGAGGAAAGAGAGGTTGCTGAAAAAGCAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGGCTGGCACCTGGGCGTTCACTTCGTGATAGGAAACCTGTTACTTATACATTTGATGATTATGATCGGTCTATCAATGAGGCTATTAAGATAACCAAACGGAAACAACCATCCCCAGAACTTATACCTATGAGAGAAGTGATAGGAAGCCCTGAAACTTTGACTAATGGTAAATGGAGTGGTCCTTCACATGTCTCGGAACATCTGAATTTTGATATGCCATCTCCAAAATCACCTGACTTTGATGATGCTGAAGAAGAGCATAAATCTGAATCATTGGATCGAAGCAATCGGCGAAGACACAGGCCTATGCGGTATTCAGAGAAAGAGTTTGTTGAAGCATTATCAGATAACGAGGCAGACTTTGACAGTGATGATGATATTGTTGGAGAAGCCATATATGATGAAGAATATCTCAGGAAGCGTAAGCAGAGAAGGAACTTTTCTAGTAGTTCTGAGGGAGATGAAGAATATAGGTGGGATGATGACAATGTTGAAGATGAAGAAGATGATGATGATGATGAAGATTTCCTGAGTATCAGTGAAGATAGTGACAAGCCCCCTAAAGTTAAGCAATTACCAGGCCGTACTAGGAGGGAAACTAAAGTCAGGTCTGTAGATGAGATTCAATTAGGTCTACGGCGCAGTAAGAGGGCCACCAGAAACCGCATCAATTACCGACAAATAGAGATGTCAGAATCAGAGGCAGAGTCTATGAAACCTGAGAAGTCTAATGCTTCAGATGATCACTCAGATCCCAGCGAGAATGGGGATTATATGACGGAAAGTGAAGAATCAGATGGCCATGATGGCAAAGATCAGGAATTGAAAGTAGATAGTAATTCCATTACTTATCGGGCAGTAGAAGAGAAAGAACAAAACCAGCCTCCTGAAAAATTAAGTAGTCCTGGTCAGGAGGAAGTTGAAGGCATGAAAAAAAGGCGTTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTTGACGATACAATAATGAAAGACGAAGATAATGATGATTGCTGA 2190 0.4411 MSQGSLPPPPPIPSEPCNRGSSPEPNSQNRIPDSQNGIPTSKEETTTAPTTTRSNRPSRACTIRAASRLYSTVQPAIQRKSKAAKKEQRREDSPTQQQQQQCSKIVTPLVEPPSPTQLPRWNLRSMWELASVLNFLHVFRPLLNISVEFSAEEFETALLMPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWLWVADGEVPIVASHGAEVEAYKSLDPGIRVIILKALCDIRVEQEDIRSYIDNSLRHGVQLSTFRKERIGGDSHGVSYWYEDDPVVGHRLYREIRKTEVVQVKKGKAKGSQVLSSTSYQWEAVATNFDEFQDVSDKLFSSKNRTEASVGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKQPSPELIPMREVIGSPETLTNGKWSGPSHVSEHLNFDMPSPKSPDFDDAEEEHKSESLDRSNRRRHRPMRYSEKEFVEALSDNEADFDSDDDIVGEAIYDEEYLRKRKQRRNFSSSSEGDEEYRWDDDNVEDEEDDDDDEDFLSISEDSDKPPKVKQLPGRTRRETKVRSVDEIQLGLRRSKRATRNRINYRQIEMSESEAESMKPEKSNASDDHSDPSENGDYMTESEESDGHDGKDQELKVDSNSITYRAVEEKEQNQPPEKLSSPGQEEVEGMKKRRFLDLNELAPSSGFDDTIMKDEDNDDC 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1206 729 MobiDBLite consensus disorder prediction 693 707 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 521 543 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 466 489 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 1 113 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 616 667 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 437 489 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 569 603 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 19 78 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 544 568 - -
Glsi13g1206 729 PANTHER REMODELING AND SPACING FACTOR 1 52 695 IPR028938 GO:0006355|GO:0031213
Glsi13g1206 729 Pfam DDT domain 131 176 IPR018501 -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 1 18 - -
Glsi13g1206 729 MobiDBLite consensus disorder prediction 521 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1206 Glsi-ChrGlsi13 29541846 29550711 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Glsi13g1206 DDT 1.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0780 02 5043601 5050200 Glsi13g1206 13 29541846 29550711 CCT