Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1184 ATGGAATTTGCTTTGCGGAGATCTGGCCAAGGAGATGGAGTGAAGGAAGAGAAAAGAAGTGAATCTAGTACTGCTGGTGATGATGAAGGTCCTCAACATAAACAAGACACAGTTGCGGAGGTGCCACCCATGAATGCTACCGAAAGATCCATGGTGGAGAATGGACCAGCTGCATCCTCAACCAAAAAGGAAGAGGTTGGTGAGCTAGAATCTGCCAAAGCAGAAATGGGTGAGGTCAGAGAAGAAAACCAAAGGTTGAAGATGTGTTTAGACCGAATACTGAAGGATTACCAGGCCCTGCAAATGCAATTTCACGTTATAGTTCAACAAGAAACAAATCAATCTGCTGATAAAGGAAATGATAACCATCAAGACGAACTAGCTGAGGAATCGGAGCTAGTTTCCCTCTGCCTTGGAAGAGTTCCGAGCAATCCAAAATCTGATGAGAAAATCAGAGCTTCTAAACCATTACAGGAAGAAGAATTCAAACAAGACTTGGCGCTTGGACTGGACTGCAAATTCGAGACATCCAAATCAGGAAGCACAACTGAAGCTTTGCCAAATCCAAGCCCCGCCATTAGTTCTGAAGTACCCAAGGAGGATGCCGGAGAGAGTTGGCCGCCTAGTAAGGTTCTCAAGACAATGAGAGATACCGCAGATCAGGATGAAATTTCCCAACAGAACCCTGCAAAAAAGGCCAGAGTTTGTGTGAGAGCAAGATGCGATACCCCAACTATGAATGATGGATGCCAATGGAGGAAATATGGGCAGAAGATTTCAAAGGGAAATCCTTGTCCTAGGGCATACTATCGTTGCACGGTTGCGCCTTCTTGCCCAGTGCAAAGATGCGCTGAGGAAATGTCCATTCTAATCACGACCTACGAAGGAACCCACAACCACCCTCTTCCTCTTTCTGCTACAGCCATGGCTTCCACCACCTCTGCTGCTGCTTCCATGCTATTGTCTGGCTCATCGTCAAGCTCTAACCCTGGTTCAATCTCTTCAACTCCTGCTGATTTCCATGGCCTCAACTTTTATCCATCTGATGCTTCCAAATCAAAGCAATTCTACCTGTCTAATCCTGCACTATCATCTTCACCTTCGCACCCAACAATCACTCTTGACCTCACCTCAAATCCAGCCTCTTCCTCATCCCACTTTGCTAGATTTACATCAAACTACAACCCTCCAAGATACCCTTCTTCCACAAGTCTCAACTTCAGTGCTTCCTCCGAATCCAATGCAATGAGTTGGAGCAATGGGTTCCTCAGCTACAATACCCAACCATATAATAGCAACAGGAGTGTCCTTGGCAGCATAAACCTTGGAAGGCAATTACCAATGGAGAATATCTACCAGTCCTACATGCAGAAGAACAATAACCCAAGTCCTCCTCAAGGAGCTCAACATTCTCTACCAGATACAATAGCTGCAGCAACGAAAGTGATCACGGCAGACCCAACTTTTCAGTCAGCTTTGGCTGCGGCGCTTACTTCAATTATTGGCACTGGAAATAGTAGTAGTAGTGGCGTTGGAGAAAATTTATCTGGTCAGAAAGCGAAATGGGGCGAGCTCCTTCCAGCTGCTTCTGCTGCTACCTTGGCGTCTTCAACTAATTCCAAAGCCAATGGCTGTGCGTCAAGCTTCTTGAACAAAACAACTCCTACCAATAATACACAGCCGGGAAGTTTGATGTTTCGTCCGCCATCTTTGCCACTTTCTAGCTCCAAGAATGCATCTGCGTCTCCTGCTGATAACAGAGACAACACCAGTTGA 1776 0.4606 MEFALRRSGQGDGVKEEKRSESSTAGDDEGPQHKQDTVAEVPPMNATERSMVENGPAASSTKKEEVGELESAKAEMGEVREENQRLKMCLDRILKDYQALQMQFHVIVQQETNQSADKGNDNHQDELAEESELVSLCLGRVPSNPKSDEKIRASKPLQEEEFKQDLALGLDCKFETSKSGSTTEALPNPSPAISSEVPKEDAGESWPPSKVLKTMRDTADQDEISQQNPAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVQRCAEEMSILITTYEGTHNHPLPLSATAMASTTSAAASMLLSGSSSSSNPGSISSTPADFHGLNFYPSDASKSKQFYLSNPALSSSPSHPTITLDLTSNPASSSSHFARFTSNYNPPRYPSSTSLNFSASSESNAMSWSNGFLSYNTQPYNSNRSVLGSINLGRQLPMENIYQSYMQKNNNPSPPQGAQHSLPDTIAAATKVITADPTFQSALAAALTSIIGTGNSSSSGVGENLSGQKAKWGELLPAASAATLASSTNSKANGCASSFLNKTTPTNNTQPGSLMFRPPSLPLSSSKNASASPADNRDNTS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1184 591 Pfam WRKY DNA -binding domain 247 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi13g1184 591 Coils Coil 62 89 - -
Glsi13g1184 591 SMART WRKY_cls 246 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi13g1184 591 MobiDBLite consensus disorder prediction 551 591 - -
Glsi13g1184 591 MobiDBLite consensus disorder prediction 63 82 - -
Glsi13g1184 591 MobiDBLite consensus disorder prediction 9 35 - -
Glsi13g1184 591 Gene3D WRKY domain 230 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi13g1184 591 ProSiteProfiles WRKY domain profile. 241 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi13g1184 591 MobiDBLite consensus disorder prediction 1 82 - -
Glsi13g1184 591 MobiDBLite consensus disorder prediction 178 207 - -
Glsi13g1184 591 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 41 508 IPR044810 GO:0003700
Glsi13g1184 591 SUPERFAMILY WRKY DNA-binding domain 239 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1184 Glsi-ChrGlsi13 29388836 29392599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1184 76 503 WRKY Transcription Factor Family AT5G15130 44.068 3.61e-84 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi13g1184 WRKY 7.2e-18 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1184 13 29388836 29392599 Glsi13g1184 13 29388836 29392599 ECH