Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1174 ATGGACCGTTTTAACTTGTTCAAAGGCTATGGCAAAGTAGACGATGATCACCTCGAAGATCAGGCTCCTGAGGCCAATCGGAAGCCTCTCCTCGCTTTCATATTTGTTTCGACCGTTTTCTGCGTCATTCTAACCATCGGTATCACTGTTGCAGCTGTGATCCCCATCTCCAAAACCGAACCACCGGAGACCCAATCAGCCCCTTCCATGGCCAACGCCGCCGCCATCAAAACCGTCTGCAACGTCACGCGTTTCCCGGCCTCCTGCTTCTCCAGCATATCCTCCCTCAGCAATTCCCCTCAAAACCCCGGCGACCCAGAATCGATTCTCAAGCTCTCTCTTCAGGTCTCCCTCAACGAACTCTCGAACCTCTCATCCTTCCTCGGAACCATGGCTTCCACTTCAAATGGGCCTGCTCTGCCTGATTGTAGGGATCAGATAGATGACGCGCTGAGTCGACTCAACGACTCGCTGTCGGCAATGGAGGTGGTTCCCGGCGACAAAGCGTTGACGGATGCCAAGATCAACGACATACAGACATGGCTGAGCGCGGCGGTGACGGACCAGGAGACGTGCGTGGATGGGTTGGAGGAGATGAAGTCAAGGGCAGCTGAGGAGGTGAAGGGGAAGATGCAGAGGTTGAAGGAGTACACAAGCAACAGCTTAGCCATCGTTGCAAATATGCGCACCTTATTACAACACTTCAATATGCCCCTTCATTGA 723 0.5339 MDRFNLFKGYGKVDDDHLEDQAPEANRKPLLAFIFVSTVFCVILTIGITVAAVIPISKTEPPETQSAPSMANAAAIKTVCNVTRFPASCFSSISSLSNSPQNPGDPESILKLSLQVSLNELSNLSSFLGTMASTSNGPALPDCRDQIDDALSRLNDSLSAMEVVPGDKALTDAKINDIQTWLSAAVTDQETCVDGLEEMKSRAAEEVKGKMQRLKEYTSNSLAIVANMRTLLQHFNMPLH 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1174 240 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 229 IPR035513 -
Glsi13g1174 240 NCBIfam pectinesterase inhibitor domain 65 228 IPR006501 GO:0004857
Glsi13g1174 240 SMART PMEI_2 71 224 IPR006501 GO:0004857
Glsi13g1174 240 FunFam Pectinesterase 72 229 - -
Glsi13g1174 240 Pfam Plant invertase/pectin methylesterase inhibitor 75 224 IPR006501 GO:0004857
Glsi13g1174 240 CDD PMEI-like_3 78 230 - -
Glsi13g1174 240 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 228 IPR035513 -
Glsi13g1174 240 PANTHER PECTINESTERASE INHIBITOR-LIKE 39 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1174 Glsi-ChrGlsi13 29284696 29285418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1174 1 240 Carbohydrate Esterase AT1G53840 38.735 3.81e-42 149