Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1172 ATGGCATCGAGCATAGGTATGATGGATAGTGCGTACTTTGTCGGCAGGAATGAGATTTTGACTTGGATCAACAACAGACTTCAGCTCAATCTCTCGCGCATTGAGGAGGCTGCATCTGGTGCTGTACAATGCCAGATGATGGACATGACATATCCTGGGGCTGTTCCAATGCACAAGGTGAATTTTGAAGCAAAGTCAGAGTATGATATGATCCAGAATTACAAAATTCTTCAGGAAGTATTCAACAAACTAAAGATTGACAAGCATATTGAAGTTAACAGGCTTGTTAAAGGCCGACCTTTGGACAACCTGGAATTCCTACAATGGCTGAAACGTTACTGTGATTCCGTGAATGGTGGCATTATGAATGAGAACTATAATCCTGTGGAGCGAAGAAGTAAGGGTGGAAAGGATAGAAATCTTAAGAGTTCTTCGAAGAGCTCAAGATCACTGCAAACAAATGTCATTAATAATCCTGGTTCAGGCGACACACTCAGTCCAAATAGAACCTCTGGGCCCAAGCAATTTAGGTCAAGTGGAGCAGCTGGCGGGGCTAATTCTTCAGCAGAGATTCAAGCTTTGTCCAAGGAGATAACTGATCTCAAACTCTCTGTGGATGTCCTGGAAAAAGAAAGAGACTTTTACTTTGCAAAACTAAGGGATATAGAAATTCTTTGTCAGACTCCAGAAGTGGAGAATGTACCTATGTCTGTAGCAATTAAGAAGATTTTATATGCTGCTGATGCAAAGGAATCTGCTTTAGAAGAAGCTCAGGATTACCTTGATCAAACTTTGGATGCTGTTAAAGCTGAAGCGGAAATTGAATCCTGA 831 0.4152 MASSIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGAVPMHKVNFEAKSEYDMIQNYKILQEVFNKLKIDKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRSKGGKDRNLKSSSKSSRSLQTNVINNPGSGDTLSPNRTSGPKQFRSSGAAGGANSSAEIQALSKEITDLKLSVDVLEKERDFYFAKLRDIEILCQTPEVENVPMSVAIKKILYAADAKESALEEAQDYLDQTLDAVKAEAEIES 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1172 276 MobiDBLite consensus disorder prediction 130 144 - -
Glsi13g1172 276 FunFam RP/EB family microtubule-associated protein 6 134 - -
Glsi13g1172 276 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 183 253 IPR004953 GO:0008017
Glsi13g1172 276 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Glsi13g1172 276 Pfam EB1-like C-terminal motif 208 246 IPR004953 GO:0008017
Glsi13g1172 276 Gene3D - 6 134 IPR036872 -
Glsi13g1172 276 MobiDBLite consensus disorder prediction 124 184 - -
Glsi13g1172 276 Gene3D - 183 270 - -
Glsi13g1172 276 Coils Coil 191 211 - -
Glsi13g1172 276 FunFam Microtubule-associated protein RP/EB family member 1B 189 264 - -
Glsi13g1172 276 SUPERFAMILY EB1 dimerisation domain-like 190 249 IPR036133 GO:0008017
Glsi13g1172 276 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Glsi13g1172 276 MobiDBLite consensus disorder prediction 145 184 - -
Glsi13g1172 276 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 6 258 IPR027328 GO:0008017
Glsi13g1172 276 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1172 Glsi-ChrGlsi13 29273433 29277424 Dispersed/Wgd