Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1147 ATGGCCATCGTCACCACACAGGCTTCTGCTGACGTTTTCCGGCCATGTACTTCTAAAGCGAGGTTTCTCGCTGGGAATTTCAGTAAATTAAACAGGGAAGTGGCTATTAGACTAATGGGGTCTCCTTCACCTACCTCCTTCAAGGTTGAAGCCAAGAAAGGAGAGTGGTTACCAGCCTTGGCCTCACCGGCTTACCTCAATGGAACTCTTCCTGGCGACAATGGATTTGATCCTCTGGGGCTTGCTGAGGACCCAAAGAACTTGAAGTGGTTTGTGCAAGCCGAGCTAGTCAATGGGCGTTGGGCCATGTTGGGTGTTGCAGGAATGCTACTTCCAGAGGTGTTCACTAAAATTGGGATCATCAATGTCCCAAAATGGTATGATGCTGGGAAAGAAGAGTACTTTGCATCATCATCGACTCTGTTTGTGATTGAGTTTGTTTTGTTCCATTACATCGAAATCAGAAGATTGCAGGACATAAATAACCCTGGAAGTGTTAACCAAGACCCCATATTTAAGCAATATAGCTTACCCCCTAATGAGGTTGGATACCCCGGAGGCATTTTTAACCCACTCAATTTTGCACCAACTCTGGAGGCCAAAGAGAAGGAAATTGCCAATGGGAGACTGGCAATGCTGGCATTCTTGGGATTTCTGGTTCAACATAATGTGACAGGCCAAGGACCATTTGACAACCTCATGCAGCACCTATCAGACCCATGGCACAACACCATCGTCCAAACACTGAGGAGCAACTAA 759 0.4664 MAIVTTQASADVFRPCTSKARFLAGNFSKLNREVAIRLMGSPSPTSFKVEAKKGEWLPALASPAYLNGTLPGDNGFDPLGLAEDPKNLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPKWYDAGKEEYFASSSTLFVIEFVLFHYIEIRRLQDINNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGQGPFDNLMQHLSDPWHNTIVQTLRSN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1147 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Glsi13g1147 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 248 IPR001344 GO:0009765|GO:0016020
Glsi13g1147 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Glsi13g1147 252 FunFam Chlorophyll a-b binding protein, chloroplastic 63 242 - -
Glsi13g1147 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1147 Glsi-ChrGlsi13 29127227 29128162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1147 56 245 Chloroplast and Mitochondria Gene Families AT3G61470 55.612 5.99e-73 221