Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1125 ATGGCGCTGTTCAGAAGATTCTTTTACCGGAAGCCACCGGATCGGCTTCTGGAGATCTCCGACAGAGTCTATGTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGAAGAAGATGAGTACAAAGATTATATGGGTGGCATTGTTGCTCAGCTACAGGATCACTTTCCTGATGCTTCTTTCATGGTGTTCAATTTTAGAGAAGGGGAGAGGCGCACCCAAATTTCTGACATATTGTCTCAGTATGACATGACAGTTATGGAATACCCTCGGCAATATGAGGGTTGTCCACTTCTCCCTTTGGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTAGTTTTGATGCACTGTGAAAGAGGAGGTTGGCCTGTGCTTGCATTTATGCTAGCAGGTCTTCTATTGTTTAGAAAACAATACAATGGGGAGCATAAAACTCTTGAAATGGTCTACAAGCAAGCTCCTAGAGAACTTCTCTTCCTTTTATCTTCTTTGAACCCACAGCCTTCTCAGTTGAGATATCTTCAGTACATTTCCAGGAGAAATTTGGGTTCTCAGTGGCCTCCATCGGACACACCCTTATATTTGGATTGTATCATTCTCAGAGTCCTTCCATTATTTGATGGTGGAAAAGGTTGCAGGCCTGTTGTTCGTGTTTATGGTCAGGACCCTTCAAAACCTGCCAATAGAAATTCTAAGCTTCTTTTTCCAACTTCAAAGACCAAACATGTTCGCCATTACCTACAGGCAGAATGTATGCTCGTGAAAATTGACGTCCATTGTCATGTTCAAGGGGATATAGTTCTGGAATGCATACATTTGGATGAAGATTTCATTCGTGAGGAGATGATGTTTAGAGTTATGTTTCATACGGCATTTGTGCGGTCAAATATATTAATGCTCAACCGTGATGAAATTGATATTTTGTGGGATGCAAAGGATCAATTCCCCAAGGACTTTAAAGCAGAGGTGCTATTTTTGGACGCTGATGCTGTTATACCTAATCTAAACACAGTCATGGTGAGTGAAGATTCAAATGAGACAGGAAGTGCTTCACCTGAGGAATTCTATGAGGTGGAAGAGATTTTCAGCAATGTAGTTGATGCGCTGCATGCGCAGGAAGGTAAGGGGGTAAATGATTCTTCTGTGGTTCAGGACAATCCAGTAGATAATAAAAATCATAAAGAGGTCTGGAAAGAGGATTTTGATCCTCACACTTTCCAGGATTGTACATCAGATGGTGTGATTCATAAATTGGACAGAAGGACAAATTCTGTTATTAATGCAGTGAAAGACATTGCTGTTGATGATGTGAAGTACAAACTCGATGAGAGAGTGTACTCAGATCCTCATGCAGTGAAAGATATTGCTATGGATGAGGGAAAAATTAAGTCAACTTCTATGGTAGACACTGCAGATATGATGAAAAATGTGGAAACAAAGGAAGTCACTGTGGATTTGCATGGGCAATTGGCCGATATAGAAAACAAATATGATATAGGTATAGACAAGCATAAAATGGAAAAGAAATTAGACTGTAAGGTAGGGCCGCAGAAATCTGACCTTTCCAAACAAAAATCAGATAAATTGCTTCCACCTGCTGCAAGAAAACAACTTTTGTCAACCTCAAAGCCAGTGGGAGATGCATTTGCAGCAAAGCAAAATATTAAACTGCAAGAACCACAAGGTGGCCAGGCAAAACTGGCAAAGCCAAATGCAGTCATGAGGTGGATTCCTCCTAACAAGAGTTCTTATACAAATTCAATGCATGTCTTGTATCCTCCGTCAAGGTATAATAGTGCATCAGCTCTTGCAAATGCTAACTCTCAGAAGGAGAAAAATGCAGATAGCAAATTACATTATGCTTCTACTCCTGTTGCTGCTAAAGCAGTTGTTTCTACTGACATGAGAAATGAACCAAAAACTCGTAAGCTGGTTGCTTCAAGATCTTCAGACTGCATAGCAGAAATAAATGTGAATGAACTGAAAATTCATAAGCTGGGCGCTTCAAGATCTTCAGGTTGCATAGCAGAAATAGATGCAAACGACCTGAAAATTCATAAGCTGGGTGCTTCAAGATCTTCAGACTGCATAGCAGAAATAGACACAAACTGCTCACCATCATCATTACCATCAATTGAAGACACATATCTTCAGTCAGCAGCACAAACACCACAGCCGCCTCCGCCTCCACCTCCATTTTATGCTAGAAACTCTTCTTTACAGGTTTTTGAACCCTTATCATTACAAGACGACATGAATCCTCCAGCCCCTTCATCTCCATCATTGTCATCATCTTCCTCTTTAAACAGAAAGGTATCTACCCAGCCGCCACTAACGCCGCCGCCGCCACCACCACCACCACCACCACCCCCAGCACCAACAACTTTAACATCAATTATTAGACAACACATAGGGACAGATATACAACCTGCAACTTCTCCCCCTCTGCCTCCCCTTTCCCCTCCACCTCCTTCATTTGTTGGGCAAATTAATGGGAGTTTCTTATCTCCTCCATCCCCTAGGAAGGCTGTTGTTTCATCAACTGTTGTTGGTGGAGAGACTAGTGGCGCTCCACCTCCTCCACCCCCTCCGCCCACATCCACCTTTTCAAGTGAAGCAATTTTCTCAAGAGTGCTTAGTTTAGCTGCCCCTAATTCTCCTCCTCCACCATCTTCTTCAATGTACAAAGCTCCTTCTTCTTCTCCTCCTCCTCCTCCTCCCCCACCCCATCCTCCTCCTACTCCTTCCACACTTAGGACTCCATCCCTTCCACCATCACCACCACCACCCCTAAATACATCACATAGAGCTCCACCTTCACCACCCCTGCCTAATTCAGGTCGAATTCCACCTCCACCTCCACCTCCTCCTCCTTTGAGTAGAGTTACACTACCCCAACCTCCACCTCTACATACTTTAAGTAGATCTCCACCACTTCCACCTCCTTTGAGTAGTGCTCCACCACCACCTCCACCTCTACCTTCTTTTAGCAGAGTTTCGCCACCCCCACCCCCACCTCTACCTCCATTTAGTATAGCTCTACCACCCCCACCTTCACAGCCTTTAAGTAAGGCTTCACCTTCCCCACCACCACTTCCATCAAGTGGAGCACCACCTCCGCCACCGCCTCCTTTAATGTTTGGAGCCCCACCTCTCCCACCTCCTTCACCACCTCCCAATGGTCAAGGCCCATCTCTACCTCTACATCTTCCTGGTGGTAGAGGCCCACCTCCACCTCCGCCTCCAGCTCCTCCTCCTCCTCTTGGTGGTAGCGGCCCACCTCTGCCTCCACCTCCTCCCTTTGGTAGCAACCCACCTCTGCCTCCGCCTCCTCCTCCTCCTAGTGGTAGAGGCCCACCTCCGCCTCCACCTCTTCCCGGTGGTAGTGGCCCACCTTTGCCTCCACCTCCTCCCAGTGGTCGAAGCCCACCTCCACCTCCACCTCCTGGAGCAAACGCTCCTGGTGCTCTTGCTCCTCCTAGACCTCCAGGGGGTGCACCTCCACCACCTCCACCCTTGGGTTCCAAAGTTGGGGCTGACGCAAGAGGGAGAGGACGTGGACTTTCACGTCCTGCTGCACCAGCCGCTAGACGTTCCTCCTTAAAGCCACTGCATTGGAGTAAAGTGTCAAGGGCATTGCAAGGAAGCTTGTGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACCAGAATTTGATGTTTCAGAGCTAGAGAGCCTTTTCTCTGCAATTGTTCCAAAACCTGCTGATTCAAGTAAATCTGGAGGGCGGCGCAAATCTGCTGGATCTAAAATTGACAAAGTCAACTTGATTGACCTGAGGAGGGCCTATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTAGCTATGGACGAGTCAGCATTAGATGTTGATCAGGTTGAAAATCTCATTAAGTTTTGTCCCACCAAAGAGGAGATTGAACTTTTGAAGGGATATACTGGTGACAAGGAGAATTTGGGGAAGTGTGAACAGAATACAGAGTTTAAGAAGAGTTTAAACACCGTGAACTCAGCCTGTGAAGAGGTCCGGAACTCTGTTAAACTGAAGGAAATTATGAAGAAAATTCTTTACTTGGGTAATACTCTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTATCTATGCAAGGTCCTAGCTGAAAAGTCGCCTGGACTCCTTGATTTTCATTTGGATCTTGTTAGTCTGGAAGCTGCTACTAAGATACAATTGAAATCATTAGCAGAAGAGATGCAGGCAATTATTAAGGGATTAGAAAAGGTTAAACTGGAACTTGCAGCATCTGAAAATGATGGCCCTGTATCCGAAGTTTTCCGTAAGATGCTGAAAGGATTCATTGCGGTTGCTGAGTCAGAGGTGGCATCTGTAACAAACCTATACTCTGTGGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGACCCTGCCCGTTTCCCATTTGAACAAGTTACTGCGACTCTCTTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATTGCAAACAAGCAGAGTTGGAGAAGAAGAAGGTTGAGAAAGATGGTGAAATGGAGAAGGCTAAAGGCATTAACTTGACAAGGAAGCGTTCTGATAGTTGA 4764 0.4509 MALFRRFFYRKPPDRLLEISDRVYVFDCCFSTDVLEEDEYKDYMGGIVAQLQDHFPDASFMVFNFREGERRTQISDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVVLMHCERGGWPVLAFMLAGLLLFRKQYNGEHKTLEMVYKQAPRELLFLLSSLNPQPSQLRYLQYISRRNLGSQWPPSDTPLYLDCIILRVLPLFDGGKGCRPVVRVYGQDPSKPANRNSKLLFPTSKTKHVRHYLQAECMLVKIDVHCHVQGDIVLECIHLDEDFIREEMMFRVMFHTAFVRSNILMLNRDEIDILWDAKDQFPKDFKAEVLFLDADAVIPNLNTVMVSEDSNETGSASPEEFYEVEEIFSNVVDALHAQEGKGVNDSSVVQDNPVDNKNHKEVWKEDFDPHTFQDCTSDGVIHKLDRRTNSVINAVKDIAVDDVKYKLDERVYSDPHAVKDIAMDEGKIKSTSMVDTADMMKNVETKEVTVDLHGQLADIENKYDIGIDKHKMEKKLDCKVGPQKSDLSKQKSDKLLPPAARKQLLSTSKPVGDAFAAKQNIKLQEPQGGQAKLAKPNAVMRWIPPNKSSYTNSMHVLYPPSRYNSASALANANSQKEKNADSKLHYASTPVAAKAVVSTDMRNEPKTRKLVASRSSDCIAEINVNELKIHKLGASRSSGCIAEIDANDLKIHKLGASRSSDCIAEIDTNCSPSSLPSIEDTYLQSAAQTPQPPPPPPPFYARNSSLQVFEPLSLQDDMNPPAPSSPSLSSSSSLNRKVSTQPPLTPPPPPPPPPPPPAPTTLTSIIRQHIGTDIQPATSPPLPPLSPPPPSFVGQINGSFLSPPSPRKAVVSSTVVGGETSGAPPPPPPPPTSTFSSEAIFSRVLSLAAPNSPPPPSSSMYKAPSSSPPPPPPPPHPPPTPSTLRTPSLPPSPPPPLNTSHRAPPSPPLPNSGRIPPPPPPPPPLSRVTLPQPPPLHTLSRSPPLPPPLSSAPPPPPPLPSFSRVSPPPPPPLPPFSIALPPPPSQPLSKASPSPPPLPSSGAPPPPPPPLMFGAPPLPPPSPPPNGQGPSLPLHLPGGRGPPPPPPPAPPPPLGGSGPPLPPPPPFGSNPPLPPPPPPPSGRGPPPPPPLPGGSGPPLPPPPPSGRSPPPPPPPGANAPGALAPPRPPGGAPPPPPPLGSKVGADARGRGRGLSRPAAPAARRSSLKPLHWSKVSRALQGSLWEELQRHGEPQIAPEFDVSELESLFSAIVPKPADSSKSGGRRKSAGSKIDKVNLIDLRRAYNTEIMLTKVKMPLPDMMAAVLAMDESALDVDQVENLIKFCPTKEEIELLKGYTGDKENLGKCEQNTEFKKSLNTVNSACEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAEKSPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKLELAASENDGPVSEVFRKMLKGFIAVAESEVASVTNLYSVVGRNADALALYFGEDPARFPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKVEKDGEMEKAKGINLTRKRSDS 1587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1125 1587 Coils Coil 1549 1569 - -
Glsi13g1125 1587 SMART it6_source 730 1584 IPR015425 -
Glsi13g1125 1587 MobiDBLite consensus disorder prediction 821 835 - -
Glsi13g1125 1587 MobiDBLite consensus disorder prediction 1563 1587 - -
Glsi13g1125 1587 Gene3D - 206 335 - -
Glsi13g1125 1587 MobiDBLite consensus disorder prediction 758 784 - -
Glsi13g1125 1587 MobiDBLite consensus disorder prediction 893 1185 - -
Glsi13g1125 1587 PANTHER FORMIN-J 1115 1584 - -
Glsi13g1125 1587 MobiDBLite consensus disorder prediction 758 1210 - -
Glsi13g1125 1587 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 335 IPR035892 -
Glsi13g1125 1587 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1277 1576 - -
Glsi13g1125 1587 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Glsi13g1125 1587 SMART PTEN_C2_2 198 337 IPR014020 -
Glsi13g1125 1587 Coils Coil 1455 1475 - -
Glsi13g1125 1587 Pfam C2 domain of PTEN tumour-suppressor protein 200 335 IPR014020 -
Glsi13g1125 1587 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1201 1574 IPR015425 -
Glsi13g1125 1587 MobiDBLite consensus disorder prediction 785 805 - -
Glsi13g1125 1587 MobiDBLite consensus disorder prediction 836 863 - -
Glsi13g1125 1587 Gene3D Formin, FH2 domain 1353 1582 IPR042201 -
Glsi13g1125 1587 Pfam Formin Homology 2 Domain 1208 1352 IPR015425 -
Glsi13g1125 1587 Pfam Formin Homology 2 Domain 1354 1548 IPR015425 -
Glsi13g1125 1587 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Glsi13g1125 1587 MobiDBLite consensus disorder prediction 728 747 - -
Glsi13g1125 1587 ProSiteProfiles C2 tensin-type domain profile. 200 338 IPR014020 -
Glsi13g1125 1587 Gene3D Formin, FH2 domain 1198 1352 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1125 Glsi-ChrGlsi13 29026887 29038115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1125 1 626 FH2 protein (formin) Gene Family AT5G07740 62.261 0.0 768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1125 13 29026887 29038115 Glsi13g1125 13 29026887 29038115 ECH