Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1124 ATGGGCTGCGTCAATTCGAAGCAAACGGTGTCGGTGACGCCTGCTATCGACCACTCTGATGTGTTTCGGGGCAATGCGGGTACGGGTACTTTGGCAAGGAACTTGGGGGAGTTGGATAAGAAGAAGAAGAAAACTGAGTCAGTGGGACTGAGCAGAAGCGAGGTGTGTGAGTCAGAGAGGGCGAGTTCAAATGAGGGGTGTGAGTCTTTGAGCTTCAGATTGGGGAATCTGCAAAAGTACGTGGAGGGAGAGCAAGTAGCTGCGGGTTGGCCAGCTTGGCTTAGCGCTGTCGCCGGTGAAGCCATTCAGGGTTGGGTGCCCCTCCGAGCTGATGCATTTGAGAAACTGGAGAAGATTGGGCAGGGTACATACAGCAGTGTTTTCCGAGCGAGGGACCTAGAGACAGGGAAGATAGTAGCACTAAAGAAGGTGCGGTTTGACATTTTTGAGCCAGAAAGTGTCAGGTTTATGGCACGAGAAATAATGATTTTGAGAAGGCTTGATCATCCAAACATAATAAAATTGGAGGGCTTGATTACTTCCAAATTGTCATGTAACATCTACCTCGTATTCGAGTACATGGAACATGACATTACAGGGCTCTTGTCTAGCCCTGATATAAAATTTAGTGAATCGCAGATTAAATGCTACATGAAACAGTTGTTATCTGGACTTGAGCATTGTCACTCACGGGGTGTAATGCATAGGGACATCAAAGGATCAAATCTTCTGTTGAATAATGAAGGGATACTAAAGGTTGCTGATTTTGGATTGGCAAAATTTTCTGTTTCTGGGCACAAGCAGCCCCTCACCAGTCGTGTTGTCACCTTATGGTACCGTCCTCCTGAACTTTTGCTGGGATCAACAAATTATGGTCCATCTGTGGATCTGTGGAGTGTTGGCTGTGTATTTGCAGAACTGCTTGTTAGGAAGCCTGTCCTTCAGGGGCGAACAGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATATTGGAAAAAGACCAGACTTCCTCATACAACTCTGTTTAAGCCACAGCAAACATATAATAGTTGCCTCCAAGAGACCTTTAAGGATTTTCCTGCAACCAGCGTGAATCTTCTACAAACTCTTCTTTCTATTGAACCATACAAACGTGAGACTGCCTCGTCTGCTCTCTCATCAGAGTATTTCAAAACAAAGCCCTATGCATGTGACCCATCAAGCTTGCCAATATACCCACCTAGCAAGGAGATTGATGCAAAACACCGGGAGGAGTCAAGAAGAAAAAAGATAGGTGGAAGAGCTCGTGGACCTGAAACAAGAAAACCATCAAGGAAGCCACTAGGATTCAGCAAATTAACGCCAGCAGAGGATTTGGCTAGTCAAACTCAAAATTGCCAAAAGGTCAATTGTAGAACTGCCCGCATCCTTAAAGAAGAGAGCACCAACATCGGTGAGGAGGCACCAAAGCCATCTACTGATAAAGCAGAAGATGCTTCCCATATAAAGAATGCCTCTCATGGAGATATTCCCTTGTCTGGACCATTGCAAGTTTCAACATCAAGTGGCTTTTCATGGGCAAGAAGGCGCAGAGATGATGCTTTAATAAGATCCCATGGTCGATCTATTTCAAGAGGACATATTTTCAATCCTTTAGAGCCTTCTACACTAAATTCCAGGAATAACTTTGACTCCAGAAACCAGGAAAATAAGGATTTTTGTGGGGGTCGCACCAACTCTAGGGGCAATGACACACGAGATATTTCTAAGCTTGCAATGCAGAATCAATGGAGCAAGTTTGAGCGGCCAGATTCATTTGATGCTTCTGATGAATACCACTCGCAAGAACTATCTATGGCACTTTATCATAAAGAAAATTCAGCATCCAAGAGAAGTAACCTTAGTAATCAGGATCCATCAGAGAGAGTAGAACTTTCAGGACCCCTACTATCTCAAATGCATACAGTTGACGAGCTATTGGAAAGACATGAGCGTCACATCCGCCAAACTGTTCGAAGATCTTGGTTTCAGAGAGGTATAACAGGCAGAGACTTACCATTGAAAGAAGCAATTAATTGTGTAAGAAGCATGGGAAGAAATTGCAAAGCCAAATGCTTTGAATTTCTCTGGAAGGAAATAGAAATTGGGCATCAGATCAAGATGATACAAGAAGCCCCTTCCGGAAGGCAATCTTCATTCTCCAACAACAACAACAAATATAAAGGCTGA 2229 0.4406 MGCVNSKQTVSVTPAIDHSDVFRGNAGTGTLARNLGELDKKKKKTESVGLSRSEVCESERASSNEGCESLSFRLGNLQKYVEGEQVAAGWPAWLSAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSCNIYLVFEYMEHDITGLLSSPDIKFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLLNNEGILKVADFGLAKFSVSGHKQPLTSRVVTLWYRPPELLLGSTNYGPSVDLWSVGCVFAELLVRKPVLQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHTTLFKPQQTYNSCLQETFKDFPATSVNLLQTLLSIEPYKRETASSALSSEYFKTKPYACDPSSLPIYPPSKEIDAKHREESRRKKIGGRARGPETRKPSRKPLGFSKLTPAEDLASQTQNCQKVNCRTARILKEESTNIGEEAPKPSTDKAEDASHIKNASHGDIPLSGPLQVSTSSGFSWARRRRDDALIRSHGRSISRGHIFNPLEPSTLNSRNNFDSRNQENKDFCGGRTNSRGNDTRDISKLAMQNQWSKFERPDSFDASDEYHSQELSMALYHKENSASKRSNLSNQDPSERVELSGPLLSQMHTVDELLERHERHIRQTVRRSWFQRGITGRDLPLKEAINCVRSMGRNCKAKCFEFLWKEIEIGHQIKMIQEAPSGRQSSFSNNNNKYKG 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1124 742 MobiDBLite consensus disorder prediction 572 588 - -
Glsi13g1124 742 MobiDBLite consensus disorder prediction 626 642 - -
Glsi13g1124 742 MobiDBLite consensus disorder prediction 416 446 - -
Glsi13g1124 742 MobiDBLite consensus disorder prediction 480 518 - -
Glsi13g1124 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Glsi13g1124 742 SUPERFAMILY Protein kinase-like (PK-like) 107 404 IPR011009 -
Glsi13g1124 742 FunFam probable serine/threonine-protein kinase At1g54610 100 195 - -
Glsi13g1124 742 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Glsi13g1124 742 MobiDBLite consensus disorder prediction 408 461 - -
Glsi13g1124 742 Gene3D Transferase(Phosphotransferase) domain 1 196 436 - -
Glsi13g1124 742 MobiDBLite consensus disorder prediction 549 564 - -
Glsi13g1124 742 MobiDBLite consensus disorder prediction 480 504 - -
Glsi13g1124 742 MobiDBLite consensus disorder prediction 545 588 - -
Glsi13g1124 742 CDD STKc_CDK9_like 113 397 - -
Glsi13g1124 742 MobiDBLite consensus disorder prediction 626 648 - -
Glsi13g1124 742 SMART serkin_6 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1124 742 FunFam probable serine/threonine-protein kinase At1g54610 196 436 - -
Glsi13g1124 742 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Glsi13g1124 742 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi13g1124 742 PANTHER CELL DIVISION PROTEIN KINASE 111 401 - -
Glsi13g1124 742 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1124 Glsi-ChrGlsi13 29015177 29020119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1124 105 457 Core Cell Cycle Gene Families AT5G10270 47.967 6.62e-111 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi13g1124 Pkinase 5e-68 CL0016