Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1113 ATGAGATTCCACCTCGCCTTGTTTCTTTTTTTGGCCTCTCTTCGTGCTACTTTAAGTCAAGAACAAGAAGTTACACATGCATCAATTTTAGTTGATGGAACTAAACCAAAAGCTGAAACTGATGATAACTTCATTTGTGCTACTATTGATTGGTGGCCTCATGATAAATGTGATTACAACCACTGCCCCTGGGGATATTCATCTGTCATAAACTTGGACTTGTCTCATCCTTTCCTTGTCAAGGCAATCCAAGCATTCAAGCCTTTGAGGATAAGAATGGGAGGTTCTTTGCAAGACCAAGTGCTGTATGAGGTAGGGAGTTTGAAGTCACCGTGTCATCCATTTCAAAAGATGAAAGGTGGATTGTTTGGATTTTCGAAGGGATGTTTACACATGAAAAGGTGGGATGAGCTGAATCATTTTTTCAATGAAACAGGAGCCATCGTGACATTTGGCTTGAATGCACTCCACGGGAGGCACCAGATTAGTCATTCTGTTTGGGAAGGAGATTGGGATTCAAGCAATGCTTACGATTTTATTAGTTACACTGTCTCAAAGGGATACAAAATCAATTCATGGGAATTTGGTAATGAGCTGAGTGGTAAGGGCATTGGTGCAAGTGTGGATGCTGCACAGTATGGGAAAGACTTGATACACCTTAAACAAATTTTAGATATAATATATGAGGACTCTCGGTTGAAACCCTCTCTCGTAGCACCAGGAGGATTCTATGTAAAGGAGTGGTATGACAAGGTTCTTCAGGTTTCAGGTTCAGGAATAGTCAATGTTCTGACTCATCACATATACAATTTGGGTGCAGGCAATGACCAGCAACTTGAAAGGAAGATTCTAGATCCTGAGAGTTTGAGCAAGGTAACATCAATATTCGCCAATCTTGCAGAAACCATTAACAGACATGGCCCTTGGTCTTCTGCGTGGGTTGGAGAAGCTGGTGGAGCATATAATAGTGGCAGTCGTTATATTTCTAACACATTCTTGAACAGCTTTTGGTACTTGGATCAACTTGGATTGGCATCCACCTACAACACCAAAGTTTATTGTAGGCAGACTTTGATTGGAGGCAACTATGGCCTTCTCAATACAACCACTTTCACTCCCAATCCAGACTATTACAGTGCACTTTTATGGCATCGGCTAATGGGAAAGAAGGTTCTTGGAGCTGCTATTGATGCGTCTTCGCCTTTTTTGCGCACTTATGCTCATTGTTCAAAAGGAAGAGATGGCGTAACATTACTGCTGATTAATTTAAGCAATCAGACTCATTTCATTCTCACTGTTCGAAACCCTGTGAGTGTGAATATGGAAGGAAATGAAGCGGTGAAAAGCATCCATAGAGAAAATTCTTTCACTTATCATCTGAAGAAGACATTTTCCTGGGTTGGAACTAAAGGATCTTATGTCACATTCAGAGAGGAATACCACTTAACTCCAAAAGATGACGACCGTCGAAGCCAAACCATGTTGCTGAATGGTATTCCACTAGAGTTAACAAACGAAGGACAAGTTCCTACAATGAATCCAATAAGCAAAAATGTACATTCTCCAATATATGTAGCTCCTTTGTCCATTGCATTTGTTGTGTATCCCAACTTTGATGCTCCAGCTTGTGCTACACCTCGAAAACTTTAG 1650 0.4091 MRFHLALFLFLASLRATLSQEQEVTHASILVDGTKPKAETDDNFICATIDWWPHDKCDYNHCPWGYSSVINLDLSHPFLVKAIQAFKPLRIRMGGSLQDQVLYEVGSLKSPCHPFQKMKGGLFGFSKGCLHMKRWDELNHFFNETGAIVTFGLNALHGRHQISHSVWEGDWDSSNAYDFISYTVSKGYKINSWEFGNELSGKGIGASVDAAQYGKDLIHLKQILDIIYEDSRLKPSLVAPGGFYVKEWYDKVLQVSGSGIVNVLTHHIYNLGAGNDQQLERKILDPESLSKVTSIFANLAETINRHGPWSSAWVGEAGGAYNSGSRYISNTFLNSFWYLDQLGLASTYNTKVYCRQTLIGGNYGLLNTTTFTPNPDYYSALLWHRLMGKKVLGAAIDASSPFLRTYAHCSKGRDGVTLLLINLSNQTHFILTVRNPVSVNMEGNEAVKSIHRENSFTYHLKKTFSWVGTKGSYVTFREEYHLTPKDDDRRSQTMLLNGIPLELTNEGQVPTMNPISKNVHSPIYVAPLSIAFVVYPNFDAPACATPRKL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1113 549 Gene3D Glycosidases 65 385 - -
Glsi13g1113 549 FunFam heparanase-like protein 3 64 385 - -
Glsi13g1113 549 PANTHER HEPARANASE-RELATED 17 544 - -
Glsi13g1113 549 SUPERFAMILY (Trans)glycosidases 40 387 IPR017853 -
Glsi13g1113 549 Pfam Glycosyl hydrolase family 79, N-terminal domain 27 343 IPR005199 GO:0016020|GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1113 Glsi-ChrGlsi13 28924286 28928666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1113 5 544 Glycoside Hydrolase AT5G07830 60.221 0.0 699