Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1102 ATGACTTCATCCCCACTAATAACGGAAGTTCAACAAAGAGTACTATCAAGACTACCAGTTGGGTATAGGTTTTTGCCTACAGATGAAGAGCTCGTTATCCACTACCTGATGAACAAGGTGCATTATAGACCTCTTCCACCTTCTCCTCTTCAAGATATTGATGCCAGGGAGCTATCCACTAAGCCTCCCCACAGATTAGCTATCCTATCTCCTATGGTCACAGTTTTTCTTCATCAAAAGTTAAGATCTCAAGTTTGCTTGCCAGGTCTTGCGGTGCAACCGCCGGAGCCACGTAGCGCTTCGCCGCCGATGGCCGACGAGGATCGTTCCCAGACTCTACGTTTACGTGCAATTACATCTCCTCCGGCCTCCTCTTGCGCGGGACGATCGGCACAGATGTAA 402 0.4876 MTSSPLITEVQQRVLSRLPVGYRFLPTDEELVIHYLMNKVHYRPLPPSPLQDIDARELSTKPPHRLAILSPMVTVFLHQKLRSQVCLPGLAVQPPEPRSASPPMADEDRSQTLRLRAITSPPASSCAGRSAQM 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1102 133 MobiDBLite consensus disorder prediction 114 133 - -
Glsi13g1102 133 SUPERFAMILY NAC domain 13 56 IPR036093 GO:0003677|GO:0006355
Glsi13g1102 133 MobiDBLite consensus disorder prediction 89 133 - -
Glsi13g1102 133 Pfam No apical meristem (NAM) protein 19 66 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1102 Glsi-ChrGlsi13 28867372 28870773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1102 16 54 NAC Transcription Factor Family AT3G04070 56.410 5.10e-08 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi13g1102 NAM 6.1e-08 No_clan