Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1099 ATGTCTCCTTGGCTTGTTGGCTTTGCTACTTTCATAGTTGCCCTCCTCGTTTATCGGCTTCTCAAGCTTTTAACTCGCCCTTCTCTCCCTCTCCCTCCGGGTCCAAGACCGTGGCCCATCATCGGAAACTTGCCTCACATGGGCCCTGTGCCACACCATGCCCTTGCAGCCTTGGCTCGCACCTATGGTCCTCTCATGTACCTCCGGCTGGGGTTCGTGGATGTCGTCGTGGCGGCATCAGCCTCCGTCGCTGCGCAATTCTTGAAGGTTCATGATGCCAACTTCTCCAGCCGGCCGCCCAACGCGGGAGCCAAATACATCGCTTATAACTATCAAGACCTAGTGTTTGCTCCCTATGGCCCACGGTGGCGGTTGCTCCGGAAAATCAGCTCCGTTCATCTATTCTCCGGCAAGGCCTTGGAGGATTTCAGACATCTGCGACAGGAAGAGGTAGCAAGGTTGACGCGCAATTTAGCGAGTGCGAGCTCAAACGCGGTGAAATTGGGACAACTGCTGAATGTGTGCACCACAAATGCACTGGGAAGGGTAATGATAGGGAGGCGCGTGTTCAACGACGGAAATGCCGGGTGTGATCCTAGGGCGGATGAGTTCAAGGATATGGTAGTGGAGGTGATGGTACTAGCCGGAGTTCTCAACATCGGTGACTTTATTCCTGCCTTGGAGTGGCTAGACCTGCAAGGAGTGCAAGCTAAGATGAAGAAACTACACAAGAAGTTTGATGCATTTTTAACCAGCATCATTGAGGAACACAAAGTTTCCACGAGTGAGAAGCACAAGGACATGTTGAGTACCTTGTTGTCACTCAAAGATGTTACAGATGATGAAGGAACCAAGCTCACGGATACGGAGATCAAAGCACTCCTTTTGAACATGTTCACTGCTGGGACCGACACGTCATCAAGCACAACAGAGTGGGCCATAGCAGAGCTAATCCGGCACCCGAGAATCCTGGCCCAAGTCCAACAAGAGTTGGACACTGTGGTGGGCCGGGACCGGCTGGTGAGCGAATTGGACTTGCCCAACCTGCCTTACTTCCAGGCCGTGGTGAAGGAAACCTTCCGGCTGCACCCATCCACCCCTCTTTCCCTTCCACGAATAGCAGCTGAGAGTTGTGAGATCTATGGCCACCACATTCCCAAGGGCGCCACTCTCTTGGTGAATGTCTGGGCCATAGCACGTGATCCAAAAGAATGGTCCAACCCTTTAGAGTTCAAGCCTGAAAGGTTCCTACCAGGTGGTGAGAAGGCTGATGTTGATGTTAGGGGCAATGACTTTGAGGTTATACCATTTGGTGCTGGACGTAGAATATGTGCGGGTTTGACCCTTGGGCTCCGCATGGTTCAGCTACTAACTGCGACCTTGGTCCATGCCTTTGATTGGGGCCTGGAAGATGGGTTGCACCCAGAAAAGCTTAATATGGATGAAGCCTATGGGCTGACCCTGCAACGAGCAGCCCCACTATCTGTCCACCCAAGGCCCAGACTTTCACCCCAAGCGTACTCATCATCATCTTAA 1536 0.526 MSPWLVGFATFIVALLVYRLLKLLTRPSLPLPPGPRPWPIIGNLPHMGPVPHHALAALARTYGPLMYLRLGFVDVVVAASASVAAQFLKVHDANFSSRPPNAGAKYIAYNYQDLVFAPYGPRWRLLRKISSVHLFSGKALEDFRHLRQEEVARLTRNLASASSNAVKLGQLLNVCTTNALGRVMIGRRVFNDGNAGCDPRADEFKDMVVEVMVLAGVLNIGDFIPALEWLDLQGVQAKMKKLHKKFDAFLTSIIEEHKVSTSEKHKDMLSTLLSLKDVTDDEGTKLTDTEIKALLLNMFTAGTDTSSSTTEWAIAELIRHPRILAQVQQELDTVVGRDRLVSELDLPNLPYFQAVVKETFRLHPSTPLSLPRIAAESCEIYGHHIPKGATLLVNVWAIARDPKEWSNPLEFKPERFLPGGEKADVDVRGNDFEVIPFGAGRRICAGLTLGLRMVQLLTATLVHAFDWGLEDGLHPEKLNMDEAYGLTLQRAAPLSVHPRPRLSPQAYSSSS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1099 511 Pfam Cytochrome P450 32 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PANTHER CYTOCHROME P450 98A9 6 508 - -
Glsi13g1099 511 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 FunFam Red aleurone1 24 499 - -
Glsi13g1099 511 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi13g1099 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1099 Glsi-ChrGlsi13 28836305 28839107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1099 8 511 Cytochrome P450 AT5G07990 68.102 0.0 729