Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1085 ATGGGGGAACACCAATCTGGTATCACAACCTATGAAGCAGAGCAACATGTGGTGGCTGCTGCTCAGCACATTCTAAAGGCGTTAGCGGCAAGTAAGAGCGTCAATGATGATTTAAGAAAAACTCTATTAGATCTTGAGATCCACTTGTCTTCAATGTCTCCCAGACTCACTGAAAGAAATGGAAAGAGTATCAGAGAATTAGAGAGGCGCCTCAAATGTGCAGAAGACAAGGTAATGAGTTGGCAGGAAAATCGTTTGATGCTATGGGACTGTGGCCCCAGGGAATTTTCTGAGTATCTAAAAGCCGTTGATGAAATTCAAACTCTGACTCAAAGTTTGCAAAGCTTGTCTGTGAATGAAGACTGGAAGCAAAAGGAACGTATTCAACGAGCTGATGGGGTTCTGCAGATTGCTATGTCGAGGCTTGAGGAAGAGTTAACCCACATTCTGGTTCAGCACAAGCAGTTTTTCGAGCCCAAATTCATGTCTTTCCATTCTAATAGAGTTGATATGGTGTATGATGAGTCATTTGCTTCAGCTGAGAATAATGAACCAATTGAGGAGGCATCAAGGAGTAGTGGTGGTAGCCAATCTGAGGCTTGTACTGTAGACTTGATTCATCCAGATATAGTTCCAGATCTCAAAGCCATTGCAAATGCCATGTTTGCTTCAAAATACCATCAGGAATTCTGTCAGGCTTTCACTACTTCCAGGAGGCATGCCTTAGACGAGTACTTTGTTATTCTTAAAATGGAAAGACTGAGCATCGAGAATGTGCTGAAAATGGAATGGGGTCGCTTGAACTTCGAGATGAAGAAATGGATTCGCGCTATGCGGATCATCGTTAAGGTCTATCTTGCTAGTGAAAAACGTTTGTGTAATCAGGTTCTGGGACACTTTGGATCTGTTTATCAGCTTTGCTTTTCTGAAATTTCAAAGGGTTTTATGCTCTCCCTTTTGAATTTTGGGGAGGCTATTTCAATGGAAACCCATACACCTGAAAGATTGTTTCGCTTACTTGACATGTACGAGGTTCTGGAGAATCTTGTCGAGGATGTAGATATCTTGTTCTTTGGAGAAGCTGGTTCTTTGGTTAGGCATGAGTTTCACAAGCTTCTTAGGAGCTTTGGTAACACTGTAAGGTCGACGTTTCTAGCATTTGAAAATGCCATTGGAACGAGTTCATCAACAAAAAGTTTCCCAGGAGGGGGCATTCACCCTCTTACCAGATATGTTGTGAACTACATCAAGACAATTACTGAATATAGTGATACCCTTGGCCTACTCCTTGCAGACGAAGGTTCAGTTTCTTCACCAGATATCGAGCATGGAACTTCAGCCCTTACGTTTGGTCCAATGGCTTGCCACTTTCGATCAATAACAGCCACTCTAGAATCCAACTTGAGCAGCAAATCCAAGTTATACAGAGATGTGGCTTTACGACATATTTTCATGATGAATAACATTCATTACATGGTCCAAAAGGTAAAGAACTCTGAACTAAGCCTTTTCTTTGGGAATGAATGGCTTCGCCAGCACACTTGGAAGTTTCAGCATGAAGCTAGAAGCTATGAGACGGTCACTTGGAATTCAGTGCTTTCTATGCTTAGGGAGGTTAGTGGGCCAATTTGTGCTTTAAGTTTAAAGGCAACCTTGAAGAAAAGGTGCACTGGTTTCACTATTGCCTTTGAGGAGGTGTACATGACCCAGACAGGGTGGTGCATCACAGATACTCAACTTCGGGAAGAACTACAAATTTCAATTACTCAGAAAGTGGTTCATGGTTACCGAACTTTTATTGGGAAAAACTCATCCAACATTGACGAGAAGTGGATCAAGTACACTGTAGATGATCTGGGAATTTATATTTTGGATCTTTTCGAAGGGTCGTCAAGATGTTTGCGCTATCATCAGCGCAGAAATTGA 1926 0.42 MGEHQSGITTYEAEQHVVAAAQHILKALAASKSVNDDLRKTLLDLEIHLSSMSPRLTERNGKSIRELERRLKCAEDKVMSWQENRLMLWDCGPREFSEYLKAVDEIQTLTQSLQSLSVNEDWKQKERIQRADGVLQIAMSRLEEELTHILVQHKQFFEPKFMSFHSNRVDMVYDESFASAENNEPIEEASRSSGGSQSEACTVDLIHPDIVPDLKAIANAMFASKYHQEFCQAFTTSRRHALDEYFVILKMERLSIENVLKMEWGRLNFEMKKWIRAMRIIVKVYLASEKRLCNQVLGHFGSVYQLCFSEISKGFMLSLLNFGEAISMETHTPERLFRLLDMYEVLENLVEDVDILFFGEAGSLVRHEFHKLLRSFGNTVRSTFLAFENAIGTSSSTKSFPGGGIHPLTRYVVNYIKTITEYSDTLGLLLADEGSVSSPDIEHGTSALTFGPMACHFRSITATLESNLSSKSKLYRDVALRHIFMMNNIHYMVQKVKNSELSLFFGNEWLRQHTWKFQHEARSYETVTWNSVLSMLREVSGPICALSLKATLKKRCTGFTIAFEEVYMTQTGWCITDTQLREELQISITQKVVHGYRTFIGKNSSNIDEKWIKYTVDDLGIYILDLFEGSSRCLRYHQRRN 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1085 641 PANTHER EXOCYST COMPLEX PROTEIN EXO70 62 629 IPR004140 GO:0000145|GO:0006887
Glsi13g1085 641 Pfam Exo70 exocyst complex subunit 272 624 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi13g1085 641 Gene3D Exocyst complex component Exo70 80 635 - -
Glsi13g1085 641 SUPERFAMILY Cullin repeat-like 85 628 IPR016159 -
Glsi13g1085 641 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1085 Glsi-ChrGlsi13 28720546 28722471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1085 1 628 EXO70 exocyst subunit family AT5G61010 43.582 0.0 530