Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1075 ATGGCGGCAAAGCTTCTGCATTCTTTAGCAGATGAAAACCCAGATTTACAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGACCGACACCATATTCTTACTGCTCGCCGCTTTACCCCTAAGAGGCTTCCTCCTCCTGGTAATCCTCTAAGAATGCACTTCCTTGGTTTTATAAATCCTGTTTATGTCAACATATATGTGTTAGCTTTCGACTTGTTAAAGGCTAAGGTTTCAGGATATTTTGCCTTCTTCCTTCCTTTCTCCACTTTTTCTTCTTCAGATGTTTGGAAAGGGGGAGGTAATTCCCATTTTAGAGATGGCAGCCTTGAAAGAGATTCAAACAGCGTTCACCATCTACGAACAGCATCTGATATGAGCTTAGACAAGAATGTGATCGAGAAACAGAGAGTTTCTACAGAGTCATCAATAGCCTCTTTCTCTTCTTCTTGTTCATCATCCGTTTCCTCTCTGGACTGTAAAGCTCAAGCAGAGGCTGCCTTTGACCGGATTATATTTCCTGAAACTCCTTCAAGGGACCCAGTTATGAACCAAACATCCATATATCTCCATTTGGGACGGCAATCCCTTGACCTGAGGGATGTAGTGAAGGACTCTATGAATAGGGAGGCCAGAGGACTATCAGTGAAGACTACAGCCAAAGAAGAAGCTACCATTCATGCTAGGAAGCACAGGGACTCCCCAAGACCTCTTCAGCTGTCAAAATCTGTTGAAGGATCTTATGGGGTTAGGGTAGATGGGAAGCAACGTGTGCCTGTTGATCTAAAGGAGTCTCTGCAAGTCCTTGCTAAGCTTAGAGAAGCACCATGGTATTGTGGTGAAGCTAGAGAACCTCCAAGATCATCCTATGAAGTTAAAGAAGGACACTGGCATTCCATCTCAAAGGATGCTCCCCGTTTTTCTTATGATGGAAGAGAAATCAGTCGTTTATCTTTTGAAACGCGAGATACCATCAAATGCCCACCAAAGATGAAAGAGTTTCCTAGACTTTCACTGGACAGTAGGGAAAATTCATGGCGCAATTACGGCACTGGCTCAAATTCTGCTCAGCTCTCGAGAGGTTTCAATGGGGGAACCTCCACCTCTGATAACAAAGTCTCTAGTCTACCCCAGTCTTCAGCAACCCAGAGGCGCCCTCCTAGTGTTGTAGCGAAATTGATGGGCTTGGAAGCTTTTCCAGATACTCAGTCCTCTAAGACTGAAACTTTTGCAGCTCAAGACAGCGGTGAGTTTTCAAGATCATCAAGAAATGGACTCACCAGGCCAATCCGAGTTTCTAATTCCCCAAAAAGCTCATTGAAAGATCCAACTTCTCCACGGCGGAAGAATCCTGATTTGGTTATGAAACCCATTTCGAGTTCAAGGTTTCCCATTGAACCAGCTCCATGGAAGCAGCAGGATGGAAATCGAAGCTCTCAGAAACCAAGGGCCATAAAAGCTCTAACTAGGGCACCAGATTCATTTTCTTCAGTTTACAGTGAGTATTACAATCTCGAATTCAAACAATCGGGAACGAATCTCAGAGCGCTCAAACAGATACGGGAAACAATGCAAGCGAAGGGGCTGCTAGAGACCGGAAAAGAAGAAGCTTCAAATGCAGGAAGTCAAAGCGACTATGAACCAAAAGCTACCAATCTAATTCAGAATTCCAGGTCAGTAAGGCAACAAAATCAACTGGGAAACGATTTTCCATCATCGACAATCAGGGGATCTGACTCAGCAAGGGCTTTTGAATCCCCAATCGTGATCATGAAACCAGCAAAATTTATTGAGAAAACTGAAATTTCTGCATCTTCAGCAATTCCAATAGGTAGCCTTTCTGGTTCCCATAAATCACAAAGTGGTGTAAATGTAGATAACAAAAAGGGTCCAGCTTCTGGTCGAGTAGCAAAAGATCAGTCTTTTAGAACCAATCAGAGGGGTGCTATTGCTAGTTCCACTTATAAGAAAGCTAGTAGTAGCAAGACTATAAGATCAGCACAATCTCAACCAAGATCTCATCAATTTCCAAAAGAAACTAGCCCAAGTTCTGTAAAGAACTCAGGATCTGTGAGCCCAAGATTGCAACAGAAGAAATTAGAGTTACGATCTGGTCCTCCTGCCACGCCATCAGATTCAAATAAACTCAAAAGGCAACCCAAGCAGGTAACAGAATCAGGTTCTCCAGGTGGAAAACTGAGAGCAAAATCCCCTAATTTTCAGCACAGTGGCGATCAATTGAGTGAGACAAGTAATGAATCAAGAACTTTAAGTTGCCAAGGGGATGAATCATCTCTGCAATCAAATAGTATCGCTGTCTCAGACTCAAAGATGGATATGGAAGTCACCAGCAGATTACAATCTGCTGAAACTATTGATAGCCCAGTCCCGTCTGTGAAGGCTATGAAGCAATTTGTTTCAAGATCAATGCAGAAGAAATCAACTGCGAGGTTGGATGAGGATGAGTTAGTTGCAGAACTTGCAACAGATGCTCCAGAACATCCGAGCCCTGTTTCAGTTCTTGATGGCTCAATATACAGAGATGATGTCACATCTCCAGTAAAGCATATATCCAATGCTCCTAAAGCTGATGATGCTCAAGAATCTAAAGAAAATGGATATGAAGATCAAAGGAACCCTGTGGATAGTCTAGTGTTTAACGGCACGGGATCGGGAGAGATAAATCACAAGAAATTGCAGAACATAGATCACCTTGTTCAGAAGCTCAGACGGCTGAACTCCACTCATGATGAAGCTAGAATTGATTACATTGCATCCCTTTGTGAAAATACAAATCCAGACCACCGATACATCTCTGAGATACTATTAGCTTCAGGTCTCCTACTCAGAGATCTGAGCTCTGAATTGCTGACATTTCAGCTTCACTCTTCACGTCATCCCATAAACCCGGAGTTATTCTTTGTCTTGGAGCAGACCAAGGCAAGTGGTTTGCTTCCTAAAGAAGAAAGCATCCCTGGAAAATCTGCTTGCTTGAAGCAAAATAAGGAGAAATTTCACAGGAAACTCATCTTTGATGCCGTGAATGAGATTCTTGGTGTAAAGCTAGGCTTAGTAGGCTCATCCACTGGGCCATGGTTGAAGCCTTACAGACTCACAAAGAAAACCCTCAATTCACAGAAGCTTCTTAAAGAACTGTGCTTTGAGATAGAAAAAATTCAAACCAAGAAACCAGAACCCAGTTTAGAAGATGAAGAGGATGGGCTGAAAAGTATACTAAATAAAGATGTGATGCATGGCTCAGAAAATTGGACAGATTTCCATTATGAAATACCTGGGGTTGTTTTGGATGTTGAGAGACTGATATTTAAGGACTTAGTTGATGAGGTTGTGATTGGTGAAGCAGCTGGTTTGCGAGTCAAGCAGGGTAGGCGCAAAAAGCTATTTGGAAAGTAG 3420 0.4278 MAAKLLHSLADENPDLQKQIGCMTGIFQLFDRHHILTARRFTPKRLPPPGNPLRMHFLGFINPVYVNIYVLAFDLLKAKVSGYFAFFLPFSTFSSSDVWKGGGNSHFRDGSLERDSNSVHHLRTASDMSLDKNVIEKQRVSTESSIASFSSSCSSSVSSLDCKAQAEAAFDRIIFPETPSRDPVMNQTSIYLHLGRQSLDLRDVVKDSMNREARGLSVKTTAKEEATIHARKHRDSPRPLQLSKSVEGSYGVRVDGKQRVPVDLKESLQVLAKLREAPWYCGEAREPPRSSYEVKEGHWHSISKDAPRFSYDGREISRLSFETRDTIKCPPKMKEFPRLSLDSRENSWRNYGTGSNSAQLSRGFNGGTSTSDNKVSSLPQSSATQRRPPSVVAKLMGLEAFPDTQSSKTETFAAQDSGEFSRSSRNGLTRPIRVSNSPKSSLKDPTSPRRKNPDLVMKPISSSRFPIEPAPWKQQDGNRSSQKPRAIKALTRAPDSFSSVYSEYYNLEFKQSGTNLRALKQIRETMQAKGLLETGKEEASNAGSQSDYEPKATNLIQNSRSVRQQNQLGNDFPSSTIRGSDSARAFESPIVIMKPAKFIEKTEISASSAIPIGSLSGSHKSQSGVNVDNKKGPASGRVAKDQSFRTNQRGAIASSTYKKASSSKTIRSAQSQPRSHQFPKETSPSSVKNSGSVSPRLQQKKLELRSGPPATPSDSNKLKRQPKQVTESGSPGGKLRAKSPNFQHSGDQLSETSNESRTLSCQGDESSLQSNSIAVSDSKMDMEVTSRLQSAETIDSPVPSVKAMKQFVSRSMQKKSTARLDEDELVAELATDAPEHPSPVSVLDGSIYRDDVTSPVKHISNAPKADDAQESKENGYEDQRNPVDSLVFNGTGSGEINHKKLQNIDHLVQKLRRLNSTHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSRHPINPELFFVLEQTKASGLLPKEESIPGKSACLKQNKEKFHRKLIFDAVNEILGVKLGLVGSSTGPWLKPYRLTKKTLNSQKLLKELCFEIEKIQTKKPEPSLEDEEDGLKSILNKDVMHGSENWTDFHYEIPGVVLDVERLIFKDLVDEVVIGEAAGLRVKQGRRKKLFGK 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 709 728 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 532 551 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 338 388 - -
Glsi13g1075 1139 Pfam Domain of unknown function (DUF4378) 936 1117 IPR025486 -
Glsi13g1075 1139 Pfam DUF761-associated sequence motif 377 407 IPR032795 -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 343 388 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 741 781 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 640 699 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 854 884 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 613 781 - -
Glsi13g1075 1139 Coils Coil 904 924 - -
Glsi13g1075 1139 PANTHER LONGIFOLIA PROTEIN 1 1137 IPR033334 GO:0051513
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 613 629 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 402 485 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 402 443 - -
Glsi13g1075 1139 MobiDBLite consensus disorder prediction 863 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1075 Glsi-ChrGlsi13 28665360 28669990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1075 185 1138 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.061 0.0 626