Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1039 ATGAACACCCCAGTGGACAAGAGGGAGCATCAGTTTCTGCTGAAGAGAAGAAAATATAACAACTCTGAAGCTTCCGGGGATTCAAGGAGAAGAAGCTGCAGCAACGAAAACGAACAAGAGCGGCACAGAGGAGTCTCCACCACGCTGAAGCTTTACGAAGACCCTTGGAAGATCAAGAAGACACTGACTGATAGTGATCTGGGAATCTCCAGCAGACTCCTGTTGGCCACAGAGTTGGTCAAAAACCAGATTTTGCCTATGCTGGGTGTTGATAATGCAAGAGCCGCCGAGACTGAAGAAGGCACCCCAGTTAGGGTTTGGGACATGGATTCCAGATCCATGCACCAACTGCTCCTCAAGAGATGGTCTTCATCCAAGAGCTATGTTTTTATTGGAAAGTGGAACCAAGATTTCGTGAGAAGAAGGGAGCTGAAGAAAGGGGACGAGATTGGATTCCACTGGGATCCGTATAACTGCGTTTTCAACTTTTGCGTTCTTAAACGGGCTATACCAACTTAA 519 0.4721 MNTPVDKREHQFLLKRRKYNNSEASGDSRRRSCSNENEQERHRGVSTTLKLYEDPWKIKKTLTDSDLGISSRLLLATELVKNQILPMLGVDNARAAETEEGTPVRVWDMDSRSMHQLLLKRWSSSKSYVFIGKWNQDFVRRRELKKGDEIGFHWDPYNCVFNFCVLKRAIPT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1039 172 MobiDBLite consensus disorder prediction 17 46 - -
Glsi13g1039 172 CDD B3_DNA 56 167 IPR003340 GO:0003677
Glsi13g1039 172 Gene3D - 54 169 IPR015300 -
Glsi13g1039 172 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 29 168 - -
Glsi13g1039 172 SUPERFAMILY DNA-binding pseudobarrel domain 55 165 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1039 Glsi-ChrGlsi13 28451680 28452198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1039 58 153 RAV Transcription Factor Family AT1G50680 32.039 1.97e-06 44.7